Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0195 ATGGAATCAAATGCGTTCTCGTTCATCTCTAAGGGTTGGAGAGAGGTTCGTGACTCGGCTGACGCGGATTTTCGTCTAATGAAGGACCGAGCCAACTCGTTCAAGAACCTAGCCACGTCATTTGACCGCGAACTCGACAACTTTTTGAATTCCGCCACTCCTCCGCCGTTCTCCGTCCCCGCCATGGACTCTCCTCCACCGCCGGAGATTGAGTTCGTGAAGAAGTTGCGGCCTAAATTGTCTGCAATGCGGAGGGCGTACTCTTCACCTGATTTCAGCAAGAATGTTCTGGAGAAGTGGCGCCCTAAGGCACGGATTCGGATAGATTTATCGGCGATTCGGAACGCGATTGTTTCGGAGGTGGAAGAGGCAGAGGAATCTGGTGAGGAGGTTGTGGAATTTGAGAGGGAAAAGAGGGGAAGGAGGTTGAGTTTGAAGGAGTTTTGGGATTGGGGAGAGTGGAAAGGAGAGGGTGAAGCTCGTGATTGGGAACCAATTCGGAAGTTGAAGAGTAGGTTTAAAGAGTTCGAGAAGAATAGTGAGTTCGTGGAGAAATTCAAGTCCAGTTTGAAATCAATGTACAGGCATCCTCAAGAGTCAAAGGAAGTGCCACCACTGGATGTACCGGAACTTCTAGCATACTTTGTTAAACAATCTGGGCCATTTTTGGATCAAATTGGAGTTAGAAGAGAGATATGTGACAAGATTGTAGAAAACTTGTATAGCAAATGCAAGAACAAACTTCTACTGCAGTCCCTTTCTGGAGAAGAATCTGGTGTTGTTGGGAATGAAAACATAAATGATGAATTGGATTTGCGAATAGCAAGTGTCCTTCAGAGCACTGGGCACCGGTATGATGGTGGATTCTGGACACACCATGCAAAGCGTGAAGCATCAGACAATGAAAGACATGTCGCAATAGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCTGTAAACCCACTATTTCGAGCTGCATATTTATCACAATCCGCAAAGCAGAAAGTCACTCTGTTGGTTCCATGGCTTTGTAAATCAGATCAAGAACAAGTTTATCCCAGCAATGTTACTTTTACTTCACCTGAGGAGCAGGAAGCTTATATACGTAACTGGCTGGAGGAAAGGATTGGTTTTAAGGCAGACTTCAAAATTTCCTTTTATCCCGGGAAGTTTTCAAAATCAAGACGTAGTATATTACCGGCTGGAGATACTTCTCAATTTATACCATCCAGGGACGCTGACATTGCTATTCTTGAAGAACCAGAACATTTGAATTGGTATCATCATGGTAAGCGTTGGACAGACAAATTCAACCATGTTGTTGGTGTTGTCCACACGAATTACTTAGAATACATCAAGAGGGAGAAAAATGGGGCTCTTCAGGCATTCCTTGTGAAACACATAAACAACTGGGTTACAAGAGCATATTGTGACAAGGTTCTTCGCCTCTCAGCTTCCACTCAAGATTTACCCAGGTCTGTAATTTGCAATGTCCATGGTGTGAATCCCAAGTTCTTACAAATTGGAGAGAAGATTGCTGCAGAAAGGGAGCTAGGCCAGATAGCCTTCACAAAAGGGGCATATTTCTTGGGAAAGATGGTATGGGCAAAGGGATATAAGGAGTTGATAGATTTGTTAGCAAAGCATAAGACTGACCTTGATGGCTTTAACATGGATGTATTTGGAAGCGGAGAGGACGCTAATGAAGTTCATATGGCAGCTAGGAGGTTGGATTTGAACCTCAACTTCCAGAGTGGAAGGGACCATACAGATGATTCTCTTCATGGGTACAAAGTCTTCATAAATCCCAGCGTTAGTGATGTGCTATGTACCGCTACAGCTGAGGCACTTGCCATGGGAAAATTTGTAGTTTGTGCTGACCATCCATCAAATGAGTTCTTCATGTCATTTCCCAACTGTTTGACTTACAAGACATCCAACGACTTCGTGGCGAAAGTAAAAGAAGCATTAGAAAATGAACCTCATCCTCTTACACCTGGGCAAAGATATCAACTTTCTTGGGAGGCTGCTACTCAAAGATTTATTGAATATTCCGAGCTGGACGGAATATTGAACACCGAAAAGGATGGTGCTAAGTCAAGTACATATAATAGAAAGCGCATCACCAAGTCAGTGTCATTGCCTAATCTGACACAAGTTGTAGATGGAGGCTTGGCATTTGCTCACTACTGTATGACGGGGAACGAATTCCTGAGATTATGTTCAGGAGCAATACCTGGAACCCGTGATTATGACAAGCAGCACTGCAAAGACCTTAATCTCATGCCACCACAGGTAGAAAATCCTATCTATGGCTGGTAA 2328 0.4407 MESNAFSFISKGWREVRDSADADFRLMKDRANSFKNLATSFDRELDNFLNSATPPPFSVPAMDSPPPPEIEFVKKLRPKLSAMRRAYSSPDFSKNVLEKWRPKARIRIDLSAIRNAIVSEVEEAEESGEEVVEFEREKRGRRLSLKEFWDWGEWKGEGEARDWEPIRKLKSRFKEFEKNSEFVEKFKSSLKSMYRHPQESKEVPPLDVPELLAYFVKQSGPFLDQIGVRREICDKIVENLYSKCKNKLLLQSLSGEESGVVGNENINDELDLRIASVLQSTGHRYDGGFWTHHAKREASDNERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLCKSDQEQVYPSNVTFTSPEEQEAYIRNWLEERIGFKADFKISFYPGKFSKSRRSILPAGDTSQFIPSRDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCDKVLRLSASTQDLPRSVICNVHGVNPKFLQIGEKIAAERELGQIAFTKGAYFLGKMVWAKGYKELIDLLAKHKTDLDGFNMDVFGSGEDANEVHMAARRLDLNLNFQSGRDHTDDSLHGYKVFINPSVSDVLCTATAEALAMGKFVVCADHPSNEFFMSFPNCLTYKTSNDFVAKVKEALENEPHPLTPGQRYQLSWEAATQRFIEYSELDGILNTEKDGAKSSTYNRKRITKSVSLPNLTQVVDGGLAFAHYCMTGNEFLRLCSGAIPGTRDYDKQHCKDLNLMPPQVENPIYGW 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0195 775 Gene3D Glycogen Phosphorylase B; 393 502 - -
Lal20g0195 775 Gene3D Glycogen Phosphorylase B; 503 663 - -
Lal20g0195 775 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 4 775 - -
Lal20g0195 775 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 305 685 - -
Lal20g0195 775 CDD Glycosyltransferase_GTB-type 434 636 - -
Lal20g0195 775 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 4 775 IPR044525 GO:0046481
Lal20g0195 775 Pfam Glycosyl transferases group 1 530 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0195 Lal-Chr20 1348070 1353894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0195 4 597 Glycosyltransferase AT3G11670 67.928 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0195 K09480 - gmx:548059 1326.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0195 20 1348070 1353894 Lal20g0195 20 1348070 1353894 ECH
Lal11g1278 11 16416788 16422057 Lal20g0195 20 1348070 1353894 LSH