Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0176 ATGAGTGTAGAAATTCATTATTCCCTCGCTTGCATCTCAATTCTCAACCATGGCGATGACAGTTCACGCCTTGCTGGGTTGGCTTTTATGTTTTCATCTAGCATTTTGCTACAGATTCTGGCATGTGCAGTATACAACAATTGGTGGCCAATGTTATCAGCTCTCATGTATGTTCTTGTGCCAATGCCTTGCTTATTCTTTGGAGGTGGATCTACTCAATTTCTGATGAGCCGTGATGGTGGCGGTTGGATAGATGCTGCAAAGTTTTTAACTGGAGCATCGTCCATGGGGAGCATAGCGATTCCTATAATCCTTAAGCATGCTCATATGATTGAGACAGGAGCGATGCTCATCGAGCTTGTATCTTTCTTCATATTTGTATGTACTGTTTTATGTTTCCACCAAGCGAGCCTTGATGATGATTGGTAA 429 0.4242 MSVEIHYSLACISILNHGDDSSRLAGLAFMFSSSILLQILACAVYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASSMGSIAIPIILKHAHMIETGAMLIELVSFFIFVCTVLCFHQASLDDDW 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0176 142 PANTHER LEPTIN RECEPTOR-RELATED 24 141 IPR007262 -
Lal20g0176 142 PANTHER RH04491P 24 141 - -
Lal20g0176 142 Pfam Vacuolar protein sorting 55 25 136 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0176 Lal-Chr20 1218335 1221068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0176 20 137 EF-hand Containing Proteins AT1G32410 53.719 1.09e-40 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0176 - - pvu:PHAVU_001G192100g 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0176 20 1218335 1221068 Lal20g0176 20 1218335 1221068 ECH
Lal1g1744 1 19847631 19849428 Lal20g0176 20 1218335 1221068 LSH