Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1744 ATGAAAACACAGAGTGCAGGCATATTCTGTTTGCTTTCTATTTGCCGTGGCAGGCATGTGCGATATACAACAATTGGTGGCCTATGTTATCAGCACATTGCACCTGCAGCTCTCATGTATGTTCTGGTGCCCATGCCTTGTTTATTCTTTGGAGGTGGGTCCACTCAGTATCCGATAAGCCGAGAGGGTGGCGGTTGGATAGATGCTGCAAAATTTTTGACCGGAGCTTCATCCGTGGGGAGCATAGCGATTCCTATAATCCTTAAGCATGCGCATATGATTGAGACCGGAGCGATGATCATCGAACTTGTATCTTTCTTCATATTTGTATGTACTGTTTTGTGTTTCCACCAAGCAAGCCTTGATGATGATTGGTAA 378 0.4497 MKTQSAGIFCLLSICRGRHVRYTTIGGLCYQHIAPAALMYVLVPMPCLFFGGGSTQYPISREGGGWIDAAKFLTGASSVGSIAIPIILKHAHMIETGAMIIELVSFFIFVCTVLCFHQASLDDDW 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1744 125 PANTHER RH04491P 26 124 - -
Lal1g1744 125 PANTHER LEPTIN RECEPTOR-RELATED 26 124 IPR007262 -
Lal1g1744 125 Pfam Vacuolar protein sorting 55 37 119 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1744 Lal-Chr1 19847631 19849428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1744 36 120 EF-hand Containing Proteins AT1G32410 50.000 5.12e-24 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1744 - - ccaj:109791126 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1744 1 19847631 19849428 Lal1g1744 1 19847631 19849428 ECH
Lal1g1744 1 19847631 19849428 Lal20g0176 20 1218335 1221068 LSH