Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0171 ATGAGTTTCGGTACCATAAAAATGGCAACCTGTATGTCTACAAGTTTTGCTCCTTCAAATTCTAGACATTTAGCTAGGGTTATGGCTATTCCTGGAGGAAGGACACTCACAGAGAATCATAATGGGAGATCATGTTTCATGAAAATGTATGAAAACAAGTATGGATTTTCGGGTGGTAATCGAAAATCGGGTTTGTTACAAGTTAAGTGCTCTTCCAATTCCCACAGCGCCTATCATAGTAAAGATCCTTTTCTCGATCTACATCCTGAGGTGTCGATGCTCAGAGGAACAGGTAGCAGTGGAGTGAACAACCCTATAAAAGATATGCCCAATGGAAATGTTGCTGAAAGTTTAGAACCCATTTCTAGTTCAAGTAATTACAATGAGGCAAAGATCAAAGTCATTGGTGTTGGTGGTGGTGGCTCGAATGCAGTCAATCGCATGATCCAGAGCTCCATGAATGGTGTAGAGTTCTGGATTGTCAACACTGATGTTCAAGCCATGAGAGTATCACCTGTCTTTCCGGATAACCGTTTGCAAATTGGTCAAGAGCTAACTCGAGGTCTTGGCGCTGGTGGTAATCCTGAGATTGGCATGAATGCTGCCAAAGAAAGCAAAGAATCAATTGAGGAAGCTGTTCATGGAGCTGATATGGTCTTTGTTACGGCTGGAATGGGTGGAGGAACTGGCACTGGTGGAGCTCCAATTATTGCTGGTGTTGCAAAGTCGATGGGTATTCTGACTGTTGGTATTGTCACAACCCCTTTCTCATTTGAAGGACGAAGGAGGGCAGTTCAAGCGCAAGAAGGAATTGCAGCCTTAAGAGATAATGTCGATACTCTGATAGTTATACCAAATGACAAACTGCTGACTGCAGTTGCTCCATCTACTCCTGTAACTGAGGCGTTCAATCTGGCTGATGATATTCTTCGACAAGGTGTTCGTGGCATATCTGATATCATTACGATACCAGGATTGGTGAATGTAGACTTTGCTGATGTTCGAGCTATAATGGCTAATGCAGGTTCTTCACTTATGGGGATAGGAACTGCAACTGGGAAAACAAGGGCAAGAGATGCTGCATTGAATGCCATCCAGTCACCTTTATTAGATATTGGTATAGAGAGGGCTACTGGAATTGTATGGAACATAACTGGTGGAACTGATCTGACCTTGTTCGAGGTTAATGCTGCAGCAGAGGTTATATATGACCTTGTGGACCCTACTGCTAATTTAATATTTGGATCAGTAATAGATCCATCACTAAATGGCCAAGTAAGCATAACATTAATTGCAACTGGATTCAAGCGTCAAGAGGAAAATGAAGTGAGACCTACACAGGCCACTCAACCCACACAGGGAGAGGCCATCGGTATAAATCGGCGATCTTCCTCTTTCACCGATGGCAGTTTCGTTGAGATCCCTGAATTCCTAAAGAAGAAAGGGCGTTCGCGCTATCCAAGAGCTTAA 1470 0.4333 MSFGTIKMATCMSTSFAPSNSRHLARVMAIPGGRTLTENHNGRSCFMKMYENKYGFSGGNRKSGLLQVKCSSNSHSAYHSKDPFLDLHPEVSMLRGTGSSGVNNPIKDMPNGNVAESLEPISSSSNYNEAKIKVIGVGGGGSNAVNRMIQSSMNGVEFWIVNTDVQAMRVSPVFPDNRLQIGQELTRGLGAGGNPEIGMNAAKESKESIEEAVHGADMVFVTAGMGGGTGTGGAPIIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDNVDTLIVIPNDKLLTAVAPSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGTDLTLFEVNAAAEVIYDLVDPTANLIFGSVIDPSLNGQVSITLIATGFKRQEENEVRPTQATQPTQGEAIGINRRSSSFTDGSFVEIPEFLKKKGRSRYPRA 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0171 489 Pfam FtsZ family, C-terminal domain 342 436 IPR024757 -
Lal20g0171 489 Hamap Cell division protein FtsZ [ftsZ]. 127 458 IPR000158 GO:0003924|GO:0005525
Lal20g0171 489 SMART Tubulin_C_4 327 444 IPR018316 -
Lal20g0171 489 MobiDBLite consensus disorder prediction 444 462 - -
Lal20g0171 489 PRINTS Cell division protein FtsZ signature 218 238 IPR003008 GO:0005525
Lal20g0171 489 PRINTS Cell division protein FtsZ signature 246 267 IPR003008 GO:0005525
Lal20g0171 489 PRINTS Cell division protein FtsZ signature 309 331 IPR003008 GO:0005525
Lal20g0171 489 PRINTS Cell division protein FtsZ signature 332 353 IPR003008 GO:0005525
Lal20g0171 489 SUPERFAMILY Tubulin C-terminal domain-like 324 438 IPR008280 -
Lal20g0171 489 SMART Tubulin_4 131 325 IPR003008 GO:0005525
Lal20g0171 489 MobiDBLite consensus disorder prediction 439 462 - -
Lal20g0171 489 SUPERFAMILY Tubulin nucleotide-binding domain-like 130 328 IPR036525 -
Lal20g0171 489 TIGRFAM ftsZ: cell division protein FtsZ 123 450 IPR000158 GO:0003924|GO:0005525
Lal20g0171 489 Gene3D - 341 450 IPR037103 -
Lal20g0171 489 CDD FtsZ_type1 142 434 IPR000158 GO:0003924|GO:0005525
Lal20g0171 489 Pfam Tubulin/FtsZ family, GTPase domain 131 291 IPR003008 GO:0005525
Lal20g0171 489 Gene3D Tubulin/FtsZ, GTPase domain 121 340 IPR036525 -
Lal20g0171 489 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 8 487 - -
Lal20g0171 489 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 8 487 IPR045061 GO:0003924|GO:0005525
Lal20g0171 489 ProSitePatterns FtsZ protein signature 2. 217 238 IPR020805 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0171 Lal-Chr20 1175727 1183449 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0171 K03531 - gmx:100793382 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0171 20 1175727 1183449 Lal20g0171 20 1175727 1183449 ECH
Lal11g1234 11 16115783 16120733 Lal20g0171 20 1175727 1183449 LSH
Lal1g1761 1 19949067 19955980 Lal20g0171 20 1175727 1183449 LSH