Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1234 ATGAGCGTGGATACCATAAAAATGGCAACTTATATGTCAACAAGTTTTGTGCCTTCAAATGCTAGTAATTCAGCTGGGATACTGGCTGTTCCTGGAGGAAGAACACTATCAGGGAACCACAATGGGAGATCATGTTTCATGAAAATGTACGAAAACAAGTGTGGAAACCGAAAGTTGGGTTTGTTTCAAGTTAAGTGCTCGGCCAATTCCCGCAGCAGTTATCGTAGTAAAGACTCTTTTCTAGATCTACATCCCGAGGTGTCTATGCTCAGAGGAGAACATAGCAGGGAAGTGAACAATCCGAGAAAGGATATTCCGGGTGGAAATGTTGCTGAAGACTTAGAATCAACATCTAGTTCTAGTAATTACAATGAGGCAAAGATTAAAGTCATTGGTGTTGGTGGTGGTGGCTCAAATGCAGTCAATCGCATGATTGAGAGCTCGATGAATGGTGTGGAGTTCTGGATTGTTAACACCGATGTTCAAGCCATGAGAATGTCGCCTGTCTTTTCTGATAACCGTTTGCAAATTGGTCAAGAGCTTACTCGAGGTCTTGGCGCTGGTGGTAATCCTGAGATTGGCATGAATGCTGCCAAGGAAAGCAAAGAATCAATAGCAGAGGCAGTTTATGGAGCTGATATGGTGTTTGTTACGGCTGGAATGGGTGGAGGAACTGGCACTGGTGGAGCTCCAATTATTGCTAGTGTCGCGAAGTCAATGGGTATACTGACTGTTGGTATTGTCACAACCCCTTTCACATTCGAAGGACGAAGGAGGGCAGTACAAGCACAAGAGGGAATTGCAGCCTTAAGAGATAGTGTTGATACGCTGATAGTTATTCCAAATGACAAGCTGCTGACTGCTGTTTCTCCATCTACTCCTGTAACTGAGGCATTCAATCTGGCTGATGATATTCTTCGACAAGGTGTTCGTGGCATATCTGATATTATTACGGTACCAGGACTGGTGAACGTAGACTTTGCCGATGTTCGAGCTATAATGGAAAATGCAGGTTCTTCCCTTATGGGGATAGGAACTGCAACTGGGAAATCAAGGGCAAGAGATGCTGCATTAAATGCCATCCAGTCACCTTTACTAGATATTGGTATAGAGAGGGCTACTGGAATTGTATGGAACATAACTGGTGGAAGTGATCTGACCTTGTTTGAGGTAAATGCTGCAGCAGAGGTTATATATGACCTTGTAGACCCCGCTGCTAATTTGATATTTGGAGCAGTAATAGATCCATCACTTAGTGGCCAAGTAAGCATAACATTGATTGCAACTGGATTCAAGCGTCAAGAGGAAAGAGAAGGGAGGCCTACACAGGCCAGCCAACTCACACAAGGAGACCCCGTAAGTTTTAATCGCCGATCTCCATCTTTCACCGATGGCGGTTTTGTTGAGATCCCCGACTTCCTAAAGAAGAAAGGGCGTTCACGCTATCCAAGAGCCTAA 1458 0.4451 MSVDTIKMATYMSTSFVPSNASNSAGILAVPGGRTLSGNHNGRSCFMKMYENKCGNRKLGLFQVKCSANSRSSYRSKDSFLDLHPEVSMLRGEHSREVNNPRKDIPGGNVAEDLESTSSSSNYNEAKIKVIGVGGGGSNAVNRMIESSMNGVEFWIVNTDVQAMRMSPVFSDNRLQIGQELTRGLGAGGNPEIGMNAAKESKESIAEAVYGADMVFVTAGMGGGTGTGGAPIIASVAKSMGILTVGIVTTPFTFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVSPSTPVTEAFNLADDILRQGVRGISDIITVPGLVNVDFADVRAIMENAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPAANLIFGAVIDPSLSGQVSITLIATGFKRQEEREGRPTQASQLTQGDPVSFNRRSPSFTDGGFVEIPDFLKKKGRSRYPRA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1234 485 ProSitePatterns FtsZ protein signature 2. 213 234 IPR020805 GO:0005525
Lal11g1234 485 Gene3D - 337 447 IPR037103 -
Lal11g1234 485 MobiDBLite consensus disorder prediction 441 461 - -
Lal11g1234 485 MobiDBLite consensus disorder prediction 434 467 - -
Lal11g1234 485 Gene3D Tubulin/FtsZ, GTPase domain 116 336 IPR036525 -
Lal11g1234 485 SMART Tubulin_C_4 323 440 IPR018316 -
Lal11g1234 485 Pfam FtsZ family, C-terminal domain 338 432 IPR024757 -
Lal11g1234 485 Pfam Tubulin/FtsZ family, GTPase domain 127 288 IPR003008 GO:0005525
Lal11g1234 485 PRINTS Cell division protein FtsZ signature 214 234 IPR003008 GO:0005525
Lal11g1234 485 PRINTS Cell division protein FtsZ signature 242 263 IPR003008 GO:0005525
Lal11g1234 485 PRINTS Cell division protein FtsZ signature 305 327 IPR003008 GO:0005525
Lal11g1234 485 PRINTS Cell division protein FtsZ signature 328 349 IPR003008 GO:0005525
Lal11g1234 485 CDD FtsZ_type1 138 430 IPR000158 GO:0003924|GO:0005525
Lal11g1234 485 SUPERFAMILY Tubulin nucleotide-binding domain-like 126 324 IPR036525 -
Lal11g1234 485 SMART Tubulin_4 127 321 IPR003008 GO:0005525
Lal11g1234 485 MobiDBLite consensus disorder prediction 91 118 - -
Lal11g1234 485 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 8 483 IPR045061 GO:0003924|GO:0005525
Lal11g1234 485 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 8 483 - -
Lal11g1234 485 SUPERFAMILY Tubulin C-terminal domain-like 320 434 IPR008280 -
Lal11g1234 485 TIGRFAM ftsZ: cell division protein FtsZ 117 443 IPR000158 GO:0003924|GO:0005525
Lal11g1234 485 Hamap Cell division protein FtsZ [ftsZ]. 123 439 IPR000158 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1234 Lal-Chr11 16115783 16120733 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1234 K03531 - gmx:100793382 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1234 11 16115783 16120733 Lal11g1234 11 16115783 16120733 ECH
Lal11g1234 11 16115783 16120733 Lal1g1761 1 19949067 19955980 LSH
Lal11g1234 11 16115783 16120733 Lal20g0171 20 1175727 1183449 LSH