Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0168 ATGGCAAGAATGTCATTGGAACCTTTAATTGTTGGTCGAGTCATAGGAGATGTTATTGATTCTTTTACCAGTAACATGAAAATGATTGTGAGTTACAATAACAAGCAAGTCTTCAATGGCCATGAACTCTTCCCTTCTACTATCAGCAACAAGCCAAGGGTTGAGATTGATGGTGCTGATTTGAGGTCCTTCTTTACACTGGTCATGACAGACCCTGATGTTCCTGGCCCTAGTGATCCTTATCTGAGAGAACATTTGCACTGGATGGTGACTGATATTCCAGGCACAACAGATGCCACATTTGGGAAAGACTTAGTGAGCTATGAGATTCCAAAGCCAAATATTGGGATCCATAGGTTTGTGTTTGTCTTGTTCAAGCAAAAAAGGAGGCAATGTGTTACTCAACCATCTTCAAGGGATCACTTCAATACTAAGAATTTTGCAGCAGAGAATGACCTTGGTCTCCCTGTTGCTGCTGTTTACTTCAATGCACAGAGAGAAACCGCTGCAAGAAGGCGCTAG 522 0.4215 MARMSLEPLIVGRVIGDVIDSFTSNMKMIVSYNNKQVFNGHELFPSTISNKPRVEIDGADLRSFFTLVMTDPDVPGPSDPYLREHLHWMVTDIPGTTDATFGKDLVSYEIPKPNIGIHRFVFVLFKQKRRQCVTQPSSRDHFNTKNFAAENDLGLPVAAVYFNAQRETAARRR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0168 173 Gene3D - 1 173 IPR036610 -
Lal20g0168 173 CDD PEBP_euk 30 164 IPR035810 -
Lal20g0168 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Lal20g0168 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 3 172 IPR035810 -
Lal20g0168 173 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Lal20g0168 173 PANTHER PROTEIN TERMINAL FLOWER 1 3 172 IPR031114 GO:0003712|GO:0009910
Lal20g0168 173 Pfam Phosphatidylethanolamine-binding protein 52 162 IPR008914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0168 Lal-Chr20 1157985 1160050 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0168 K06910 - pvu:PHAVU_001G189200g 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0168 20 1157985 1160050 Lal20g0168 20 1157985 1160050 ECH
Lal11g1224 11 16030535 16033387 Lal20g0168 20 1157985 1160050 LSH
Lal1g1763 1 19979720 19984702 Lal20g0168 20 1157985 1160050 LSH