Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1224 ATGGCTAGAATATCATCAGAACCTCTAATTGTTGGAAGAGTCATAGGAGATGTTCTTGATTCTTTTACAACTAGCATGAAAATGACTGTGAGTTATAACAACAAGCAAGTTTTCAATGGCCATGAGCTCTTCCCTTCCACTGTTACCAACAAGCCCAGGGTTGAGATTGATGGTGCTGATTTGAGGTCCTTCTTTACACTGGTCATGACAGACCCTGATGTTCCTGGCCCTAGTGATCCTTATATGAGAGAGCACTTGCACTGGATTGTGACTGACATTCCAGGCACAACAGATGCCACATTTGGGAAAGAGTTGGTGAGCTATGAGATTCCAAAGCCAAATATTGGGATCCATAGGTTTGTGTTTGTACTATTCAAGCAAAAACGTAGGCAATGTGTTACTCAACCTTGTTCAAGGGATCACTTCAATACTATGAATTTTGCATCAGAAAATGACCTTGGTCTCCCTGTTGCTGCTGTCTATTTCAATGCACAGAGGGAAACTGCTGCAAGAAGGCGCTAG 522 0.4253 MARISSEPLIVGRVIGDVLDSFTTSMKMTVSYNNKQVFNGHELFPSTVTNKPRVEIDGADLRSFFTLVMTDPDVPGPSDPYMREHLHWIVTDIPGTTDATFGKELVSYEIPKPNIGIHRFVFVLFKQKRRQCVTQPCSRDHFNTMNFASENDLGLPVAAVYFNAQRETAARRR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1224 173 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Lal11g1224 173 Gene3D - 1 173 IPR036610 -
Lal11g1224 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Lal11g1224 173 Pfam Phosphatidylethanolamine-binding protein 50 162 IPR008914 -
Lal11g1224 173 PANTHER PROTEIN TERMINAL FLOWER 1 4 172 IPR031114 GO:0003712|GO:0009910
Lal11g1224 173 CDD PEBP_euk 26 164 IPR035810 -
Lal11g1224 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 4 172 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1224 Lal-Chr11 16030535 16033387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1224 K06910 - pvu:PHAVU_001G189200g 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1224 11 16030535 16033387 Lal11g1224 11 16030535 16033387 ECH
Lal11g1224 11 16030535 16033387 Lal1g1763 1 19979720 19984702 LSH
Lal11g1224 11 16030535 16033387 Lal20g0168 20 1157985 1160050 LSH