Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0140 ATGATGTCTAGTGAAAATCAGAACAACCAGTTGGTGGTGCAAAATTCAGGAAGCTTAAGCTTCAGTAGCCATTTGTCAAAAGAAGATGAAGAGATGTCAAAATCTGCACTTTCAACCTTCAAAGCCAAAGAGGAAGAGATTGAGAGAAAGAAAATGGAAGTTAGAGAGAAAGTTCAGGTTCAGTTGGGTAGAGTTGAAGAAGAAACCAAACGTCTTGCTACTATTCGTGAGGAGCTTGAGGCCCTTGTAGATCCAATGAGGAAGGAAGTTGCAGTTGTGAGAAAAAGGATCGATTCCATAAACAAAGAATTAAAGCCACTAGGTCATATCTGCCAGAAGAAGGAGAAAGAATACAAAGATGCCCTTGAAGCTTTTAATGATAAGAACAGGGAAAAAGTACAGCTAATAACTAGGTTAATGGAGCTGGTGAGTGAAAGTGAAAGATTGAGGATGAAGAAATTGGAGGAGCTAAGTAAGAACATAGATTCAATGCAATGA 498 0.3876 MMSSENQNNQLVVQNSGSLSFSSHLSKEDEEMSKSALSTFKAKEEEIERKKMEVREKVQVQLGRVEEETKRLATIREELEALVDPMRKEVAVVRKRIDSINKELKPLGHICQKKEKEYKDALEAFNDKNREKVQLITRLMELVSESERLRMKKLEELSKNIDSMQ 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0140 165 PANTHER EXPRESSED PROTEIN 7 163 - -
Lal20g0140 165 PANTHER RAB6-INTERACTING PROTEIN GORAB 7 163 IPR007033 -
Lal20g0140 165 Coils Coil 37 57 - -
Lal20g0140 165 Pfam Transcriptional activator 14 163 IPR007033 -
Lal20g0140 165 Coils Coil 111 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0140 Lal-Chr20 932808 935411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0140 - - gmx:100499923 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0140 20 932808 935411 Lal13g0926 13 6496081 6497623 ECH
Lal20g0140 20 932808 935411 Lal20g0140 20 932808 935411 ECH
Lal11g1205 11 15818561 15821929 Lal20g0140 20 932808 935411 LSH