Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1205 ATGTCTAATGAACAACAAAACAACCAATTGGTGGTGCAAAATTCAGGGAGCTTAAGCTTCAGTAGCCATTTATCAAAGGAAGATGAAGAGATGCAAAGGTCAGCACTTTCAACCTTCAGAGCCAAAGAGGAAGAGATTGAGAAAAAGACAATGGAAGTTAGAGAGAAGGTTCAGCTTCAGTTGGGTCGAGTTGAAGAAGAAACTAAACGTCTTGCTACAATTCGTGAGGCCATACATCAACTTTCACATGAACTTGAAGCCTTGGCAGATCCAATGAGGAAAGAAGTTGCACTTGTTAGAAAAAAGATTGATTCAGTACACAAAGAATTAAAACCACTAAGTCATAATTGCCAGAAGAAGGAGAAAGAATACAAAGATGCCCTTGAAGCTTTTAATGAAAAGAATAGGGAAAAAGTGCAACTAATCACAAGGTTAATGGAGCTAGTAAGTGAAAGTGAAAGATTGAGGATGAAGAAATTGGAGGAGATAAGTAAGAACATAGATTCCATGCAATGA 516 0.376 MSNEQQNNQLVVQNSGSLSFSSHLSKEDEEMQRSALSTFRAKEEEIEKKTMEVREKVQLQLGRVEEETKRLATIREAIHQLSHELEALADPMRKEVALVRKKIDSVHKELKPLSHNCQKKEKEYKDALEAFNEKNREKVQLITRLMELVSESERLRMKKLEEISKNIDSMQ 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1205 171 Pfam Transcriptional activator 13 169 IPR007033 -
Lal11g1205 171 Coils Coil 64 84 - -
Lal11g1205 171 MobiDBLite consensus disorder prediction 1 22 - -
Lal11g1205 171 MobiDBLite consensus disorder prediction 23 45 - -
Lal11g1205 171 PANTHER EXPRESSED PROTEIN 6 169 - -
Lal11g1205 171 PANTHER RAB6-INTERACTING PROTEIN GORAB 6 169 IPR007033 -
Lal11g1205 171 Coils Coil 117 137 - -
Lal11g1205 171 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1205 Lal-Chr11 15818561 15821929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1205 - - gmx:100499923 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1205 11 15818561 15821929 Lal13g0926 13 6496081 6497623 ECH
Lal11g1205 11 15818561 15821929 Lal11g1205 11 15818561 15821929 ECH
Lal11g1205 11 15818561 15821929 Lal20g0140 20 932808 935411 LSH