Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0129 ATGGATCAGCTTTCTTCAACTAATATTCTCCCTGAAACATTTCAAGGGGCCAAAGATGACATTTTTATGCAATTTGCATTGGTTTGGAGCCAAATAAAAGCACCATTAATCGTCCCTTTACTAAGAATAGGAGTGGTTTTGTGCTTATTCATGTCTGTAATGATGCTAATGGAGAGACTTTACATGGGCATTGTTATTATTTTGGTGAAGTTATTTGGTAGAAAACCTGAAAAGCGTTATAAATGGGAGCCAATGAAAGATGATATGGAATTGGGAAACTCTTCTTACCCAATGGTTATTGTTCAAGTCCCTATGTATAATGAAAGAGAGGCATGTGTTTATCAACTATCAATTGGTGCTGCATGTGGCCTTTCTTGGCCTTCAGATAGGATCATTATACAAGTCCTTGATGATTCCACTGACCCAATAATCAAGGAGTTGGTGCAGTTAGAATGTCAAAGATGGGCAAGCAAAGGGGTAAATATAAGGTATGAGGTAAGGGACAATAGGAATGGATACAAAGCAGGGGCTCTAAAAGAAGGCATGAAGCGTAGCTATGTTAAGCAATGTGATTATGTTGCTATATTTGATGCTGATTTTCAGCCAGAACCTGATTTTTTATGGCGCACCATTCCTTTCCTAGTGCACAATTCTCAACTAGCCCTCATTCAGGCTCGTTGGAAATTTGTGAATTCAAATGAATGTTTGATGACTAGAATGCAAGAAATGTCACTGGATTACCATTTTACTGTGGAACAAGAAGTAGGGTCTTCCACTTATGCATTCTTTGGCTTCAATGGGACTGCAGGAGTGTGGAGAATAGAGGCTCTGAATGAGGCTGGTGGGTGGAAAGATAGGACCACAGTGGAAGATATGGACCTTGCTGTAAGAGCTAGCCTTAAGGGATGGAAGTTCTTATACTTGTCTGATTTAAAGGTTAAAAATGAATTGCCAAGTACTTTCAAGGCCTACCGTTACCAACAGCACCGCTGGTCTTGTGGACCAGCAAATCTTTTCAGGAAAATGGCCATGGAGATTATAAGAAATAAGAAAGTGACATTGTGGAAAAAGATATATGTGATCTACAGTTTTTTCTTCGTTCGGAAGGTTGTAGCACACATCAACACATTTGTGTTTTATTGCATTATATTACCTGCAACAGTTTTGGTACCTGAAGTTGAGGTTCCAAAATGGGGTGCTGTCTATATCCCTTCACTCATTACCCTTCTAAATGCAGTTGGAACCCCAAGGTCACTCCATTTATTGGTATTCTGGATTCTGTTTGAGAATGTAATGTCTCTGCATCGAACTAAGGCGACAATTATCGGTCTATTAGAAGCTAGTAGAGTCAATGAATGGATTGTTACTGAAAAACTTGGAGATGCTCTAAAGGGTAAAGCAGCTACTAAAGCATCAAAGAAGCCTAGATTCAGAATTGGAGAAAGGATTCACTTGTTAGAACTTGGTGTTGGATTCTACCTCTTCTTCATCGGTGTCTACGATGTTTTGTTCGGGAAAAACCATTTCTTCATCTACCTTTTTGTCCAAGCATTTGCCTTCTTCATCATGGCATTTGGATATGTTGGCACCTTTGTTCCCAACTCCTAG 1608 0.3949 MDQLSSTNILPETFQGAKDDIFMQFALVWSQIKAPLIVPLLRIGVVLCLFMSVMMLMERLYMGIVIILVKLFGRKPEKRYKWEPMKDDMELGNSSYPMVIVQVPMYNEREACVYQLSIGAACGLSWPSDRIIIQVLDDSTDPIIKELVQLECQRWASKGVNIRYEVRDNRNGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDFLWRTIPFLVHNSQLALIQARWKFVNSNECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIEALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAMEIIRNKKVTLWKKIYVIYSFFFVRKVVAHINTFVFYCIILPATVLVPEVEVPKWGAVYIPSLITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKGKAATKASKKPRFRIGERIHLLELGVGFYLFFIGVYDVLFGKNHFFIYLFVQAFAFFIMAFGYVGTFVPNS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0129 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 376 IPR029044 -
Lal20g0129 535 Pfam Glycosyltransferase like family 2 98 334 - -
Lal20g0129 535 PANTHER - 1 534 - -
Lal20g0129 535 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 1 534 - -
Lal20g0129 535 CDD CESA_CaSu_A2 97 335 - -
Lal20g0129 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0129 Lal-Chr20 846289 851254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0129 1 534 Miscellaneous Gene Families AT5G03760 80.000 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0129 K13680 - gmx:100810016 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0129 20 846289 851254 Lal20g0129 20 846289 851254 ECH
Lal1g1777 1 20130855 20137083 Lal20g0129 20 846289 851254 LSH