Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1777 ATGGATCAGTTTTCTTCTACTGCTACTATTCTCCCTGAAGCATTTCAAGGGGCTAAAGATGACATTACTATGCAATTTTCTTTGATTTGGAGTCAAATCAAAGCACCATTGATTGTACCTTTACTTAGAATATCAGTGGTTTTGTGCTTATGCATGTCTGTGATGATGCTGATAGAGAGGGTTTACATGGGAATTGTGATTAGTTTGGTGAAGTTATTTGGTAGAAAACCTGAGAAACGTTATAAATGGGAACCAATGAAAGATGATGTTGAGTTAGGGAACTCTTCTTATCCCATGGTCCTTGTTCAAGTCCCTATGTACAATGAAAGAGAGGTTTATCAACTATCAATTGGTGCTGCATGTGGCCTTTCTTGGCCTTCAGATAGGATCATCATACAAATCCTTGATGATTCTACTGACCCAACAATCAAGGAGTTGGTGCAGCTAGAATGCCAAAGATGGGGAAGCAAAGGGGTGAACATAAAGTATGAGGTAAGGGACAATAGGAATGGGTATAAAGCAGGGGCACTAAAAGAAGGAATGAAGCGTAGCTATGTTAAGCAATGTGATTATGTTGCAATATTTGATGCTGATTTTCAACCAGAACCTGATTACTTGTGGCGCACTATCCCTTTCCTTGTTCACAATCATGAACTAGCCCTCATTCAAGCTCGTTGGAAATTTGTGAATTCTGATGAATGTCTAATGACCCGGATGCAAGAAATGTCACTGGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTATGCCTTCTTTGGCTTCAACGGGACTGCGGGAGTGTGGAGAATTGCGGCGCTGAATGAAGCAGGAGGGTGGAAGGATAGGACCACAGTGGAAGATATGGACCTGGCTGTTCGAGCTAGCCTCAAGGGATGGAAGTTCTTATACTTATCTGATTTGAAGGTTAAAAATGAATTGCCAAGTACATTCAAAGCCTACCGTTACCAACAACATCGTTGGTCTTGTGGACCAGCAAATCTTTTCAGGAAAATGGTCATGGAGATTATAAGAAACAAGAAAGTGACATTGTGGAAGAAGATATATGTGATTTATAGCTTCTTCTTTGTTCGGAAAGTTGTAGCACACATTACAACATTTGTGTTTTATTGCATTATATTACCTGCAACAGTTGTGGTACCTGAGGTTGTGGTTCCAAAGTGGGGAGCTGTTTATATCCCTTCAATCATTACCCTTCTAAATGCTGTTGGAACTCCAAGGTCACTTCATTTACTGGTGTTCTGGATTCTCTTTGAGAATGTCATGTCACTACATCGTACAAAGGCAACGATTATCGGTCTGCTCGAGGCTAGTCGAGTGAATGAATGGATTGTCACTGAAAAACTTGGAGATGCTCTCAAGGGTAAAGCAGGAGTAAAAGCACCAAAGAAACCTAGATTCAGAATTGGAGACAGGATTCACTTGTTAGAACTTGGTGTGGGATTCTACCTCTTCTTCATTGGTGTCTATGATGTGATGTTCGGGAAAAACCACTTCTTCATCTACCTTTTTATCCAATCATGTGCTTTCTTCATCATGGCATTTGGGTATGTTGGCACCTTTGTTCCAAGCTCATAG 1605 0.4075 MDQFSSTATILPEAFQGAKDDITMQFSLIWSQIKAPLIVPLLRISVVLCLCMSVMMLIERVYMGIVISLVKLFGRKPEKRYKWEPMKDDVELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQILDDSTDPTIKELVQLECQRWGSKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDYLWRTIPFLVHNHELALIQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIIRNKKVTLWKKIYVIYSFFFVRKVVAHITTFVFYCIILPATVVVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKGKAGVKAPKKPRFRIGDRIHLLELGVGFYLFFIGVYDVMFGKNHFFIYLFIQSCAFFIMAFGYVGTFVPSS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1777 534 PANTHER BNAC09G36340D PROTEIN 10 533 - -
Lal1g1777 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 314 IPR029044 -
Lal1g1777 534 PANTHER - 10 533 - -
Lal1g1777 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 95 378 IPR029044 -
Lal1g1777 534 Pfam Glycosyl transferase family group 2 191 385 IPR001173 -
Lal1g1777 534 CDD CESA_CaSu_A2 98 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1777 Lal-Chr1 20130855 20137083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1777 3 533 Miscellaneous Gene Families AT5G03760 79.699 0.0 923
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1777 K13680 - gmx:100810016 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1777 1 20130855 20137083 Lal1g1777 1 20130855 20137083 ECH
Lal1g1777 1 20130855 20137083 Lal20g0129 20 846289 851254 LSH