Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0113 ATGGGGATTCTTCATGATGATGTAGTGATTATCAGGCCACCAGAAAAAGAAGGTGATACAACCGTCTTAACAGTCAATTGCCCTGACAAAACTGGTCTTGGTTGTGATTTGTGTCGCATCATACTCTTCTTTGGTGTCACCATTCTCCGTGGAGATGTTTCAACTGATGGGAAATGGTGCTACTTGGTTTTCTGGGTGGTGGGGAAACCTAAAACAAGGTGGAGTTTGTTGAAGAAGAGGCTAATTGGGGCATGCCCTACTTGCTCTTCAGCTTCTGGAATTTCTTATTACTGCACTGATTTGAATCCTCCAAAGCCTCCCAATGTTTTCCTTTTGAAGTTTTGTTGCCATGATCGGAGAGGCCTTTTGCATGATGTTACCGAGGTTCTTTGTGAGCTAGAGCTCACCATAAAGAAAGTGAAGGTATCTACTACACCCGATGGCAAAGTCGTGGATCTGTTTTTCATCACAGATACCAGGGAACTCCTACATACAAAGAAGAGAAAGGATGACACAATTGAACAGTTAACAACTATTTTGAAGGATGCCTTAATGACCATTGATATCGAGTTGGTTGGCCCGGAAATCCCTGCTTGTTCTCAAGCATCTTCCTTCCTTCCAACTGCAATTACAGAAGATATCTTTGATTTGGAATTGCCTGATTCGGCTCGAAGTGGGACTTTCACATCAGATTCTGTTTCCGTTGTGATGGACAATTCACTGAGTCCTGCTCACACACTCGTCCAAATTATGTGCCAAGATCACAAAGCTCTTCTTTATGACATCATGAGAACTCTAAAGGACTACAATATTCAGATTTCTTATGGACGCTTCACTACAAAATCTAGAGGGAAATGTGAGATTGACTTGTTCATTGTGCAAACAGATGGGAAAAAGATAGTTGAGTCCAGCAAGCAGAAGTCTTTGTCGGCACGCCTCAGGACGGAACTAATTCGTCCACTCAGAGTAGCTGTTGTGAGCAGGGGCCCTGATTCAGAGCTGCTGGTTGCAAACCCTGTGGAGTTGTCCGGCAAAGGGCGGCCTCTTGTTTTTTATGACATCACTCTTGCTCTCAAAATGCTTGGCATTGGCATCTTTTCGGCTGAAATTGGAAGACATGTGATTGGAGACAGAGAATGGGAAGTTTATAGAATCTTGCTTCATGAAGGGGAAGGGTTATCTGTTCCAAGGAACAAAATTGAGAAAGGAGTTTGGAAAATGTTGATGGGTTGGGAATGA 1239 0.4326 MGILHDDVVIIRPPEKEGDTTVLTVNCPDKTGLGCDLCRIILFFGVTILRGDVSTDGKWCYLVFWVVGKPKTRWSLLKKRLIGACPTCSSASGISYYCTDLNPPKPPNVFLLKFCCHDRRGLLHDVTEVLCELELTIKKVKVSTTPDGKVVDLFFITDTRELLHTKKRKDDTIEQLTTILKDALMTIDIELVGPEIPACSQASSFLPTAITEDIFDLELPDSARSGTFTSDSVSVVMDNSLSPAHTLVQIMCQDHKALLYDIMRTLKDYNIQISYGRFTTKSRGKCEIDLFIVQTDGKKIVESSKQKSLSARLRTELIRPLRVAVVSRGPDSELLVANPVELSGKGRPLVFYDITLALKMLGIGIFSAEIGRHVIGDREWEVYRILLHEGEGLSVPRNKIEKGVWKMLMGWE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0113 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Lal20g0113 412 Gene3D - 108 192 - -
Lal20g0113 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 412 IPR040217 -
Lal20g0113 412 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 412 - -
Lal20g0113 412 SUPERFAMILY ACT-like 107 182 IPR045865 -
Lal20g0113 412 SUPERFAMILY ACT-like 18 81 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0113 Lal-Chr20 745020 748515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0113 - - gmx:100797226 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0113 20 745020 748515 Lal20g0113 20 745020 748515 ECH
Lal1g1800 1 20342354 20346460 Lal20g0113 20 745020 748515 LSH
Lal20g0113 20 745020 748515 Lal13g1446 13 13956834 13962213 PCT
Lal13g1446 13 13956834 13962213 Lal20g0113 20 745020 748515 PCT