Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1446 ATGGGCATTCTGCACGATGACGTAGTGCTTATCAGACAGGCAGAGAAAGAAGGTGACCCAGCAACAGTTATTACAGTTAATTGTCCCGACAAGACTGGTCTCGGTTCTGATTTGTGTCGCATCATTCTCTTCTTTGCTCTCAACATTGTTAGAGCAGATGTATCAACAGATGGAAAATGGTGCTACATAGTTTTCTGGGTGATTGGGAAACAGAAGACAAATTGGAGTTTGTTGAAGAATAGGCTAGTTGAAGCATGCCCTACTTGCTCCTCAGCTTCTGGAATCTCTTATTACCGCTCTGATTTGTACCCACCGAAGCCTCCTGATGTCTTCCTTTTGAAGTTTTGTTGCCATGACCGGAAAGGCCTTTTACATGATGTTACAGAGGTTCTTTCTGAGCTAGAGATTATCATACATAAAGTGAAGGTATCTACTACGCCTGATGGCAAAGTGATGGATCTGTTTTTCATCACCGATACCAGGAAACTTCTACATACAACGAAGAGAAAGAATGATATGATTGAACATTTGACAGATATTTTGGATGATGCCATTACTATTGACATTGAATTGGTTGGCCCGGAAGTCACTGCTTCTTCGCAGGTGTCGTCATTCCTTCCAACTGCAATCACAGAAGATGTTGATATGGAATTGCCTGCTATGGTTCGAAGTGGAGTTCTGACATCAGGTTCTGTTTCTATCTCGATGGACAACTTGCTTAGTCCTGGTCACACGCTTGTCCAAATCATGTGCCAAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTACAACATTAAGATTTCTTATGGCCGTTTCACTACAAAACCTCGAGGGAAATGTGAGATTGACTTGTTCATCATGCAATCAGATGGGAAAAAGATAGTTGACCCTAACAAGCAGATTTCTTTGTCGTCACGCCTGAGGAGTGAACTACTTCGGCCACTCAGAGTAGCTATTGTGAGCAGGGGCCCTGATACTGAGCTTCTGGTTGCAAACCCTGTGGAGTTGTCTGGCAACGGACGACCTCTTGTTTTTTTTGATACTACACTTGCTCTCAAAATGCTTGGCATTTGCATCTTTTCGGCTGAAATCGGGAGACACACGATTGGAGATCGCGAGTTTGAGGTTTATAAAATGTTGCTGGATGAAGGGGAAGGGTTATCTATTCCAAGGAAAAAGATTGAGGAAGGAGTTTGGAAATTGCTGATGGGTTGGGAGTGA 1236 0.4304 MGILHDDVVLIRQAEKEGDPATVITVNCPDKTGLGSDLCRIILFFALNIVRADVSTDGKWCYIVFWVIGKQKTNWSLLKNRLVEACPTCSSASGISYYRSDLYPPKPPDVFLLKFCCHDRKGLLHDVTEVLSELEIIIHKVKVSTTPDGKVMDLFFITDTRKLLHTTKRKNDMIEHLTDILDDAITIDIELVGPEVTASSQVSSFLPTAITEDVDMELPAMVRSGVLTSGSVSISMDNLLSPGHTLVQIMCQDHKGLLYDIMRTLKDYNIKISYGRFTTKPRGKCEIDLFIMQSDGKKIVDPNKQISLSSRLRSELLRPLRVAIVSRGPDTELLVANPVELSGNGRPLVFFDTTLALKMLGICIFSAEIGRHTIGDREFEVYKMLLDEGEGLSIPRKKIEEGVWKLLMGWE 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1446 411 SUPERFAMILY ACT-like 108 179 IPR045865 -
Lal13g1446 411 Pfam ACT domain 113 169 IPR002912 -
Lal13g1446 411 ProSiteProfiles ACT domain profile. 112 194 IPR002912 -
Lal13g1446 411 SUPERFAMILY ACT-like 242 293 IPR045865 -
Lal13g1446 411 SUPERFAMILY ACT-like 21 80 IPR045865 -
Lal13g1446 411 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 411 IPR040217 -
Lal13g1446 411 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 411 - -
Lal13g1446 411 Gene3D - 109 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1446 Lal-Chr13 13956834 13962213 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1446 - - gmx:100818216 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1446 13 13956834 13962213 Lal13g1446 13 13956834 13962213 ECH
Lal1g1800 1 20342354 20346460 Lal13g1446 13 13956834 13962213 PCT
Lal20g0113 20 745020 748515 Lal13g1446 13 13956834 13962213 PCT
Lal13g1446 13 13956834 13962213 Lal1g1800 1 20342354 20346460 PCT
Lal13g1446 13 13956834 13962213 Lal20g0113 20 745020 748515 PCT