Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0110 ATGGAGATTGATAAAGCTATTAGAGAGTGTGATGATCAAAGACTTCAGACCAAGTACAACAACGCCACCTATGTTATTCAGAGAGCCTTAGCTTTGTATTCCTTCCGCTTATTGCTCCATCAAGATTCAACAAAGCATCATCATTCTCATTACTATCTTCCTCCACCACCTTCACTTTCATTCTTGTTCATCAACTCCAATGCTTCAAGCTCCAACAGCCTCTATCATTCTTTGCTTCTTCAAGAACACTCAGAGTTTTCTGGTATAATTCCTGCAGAAGATGGTCCTAGAAGGTGGAGCATTGGTTCTAGCAGATATGGTATTGAGGAGGTTGCTTTCAGTTTCAACGGTGGAAAGGATTCAACGGTTTTGTTGCACCTACTCAGGGCTGGATATTTCTTGCATAAAAGGGGACAGAGTAATGCCAATGGGGATCTAAAAGATTTTTCCATGCGCACAATATATTTTGAGAGTCCTTGTGCTTTCCCCGAAATAAACTCATTCACCTATGATATAGCTGCCACCTATGATTTGCAAATTGACACCATTCGCTTAGATTTCAAGTCTGGTTTGGAGGCTTTGCTAAAAGAGAATCCAATTCGAGCTATTTTCCTTGGAGTTCGAATTGGAGACCCTACTGCGGTTGGCCAAGAACAATTCTCTCCTAGTTCACCTGGGTGGCCACCTTTCATGAGAGTGAATCCCATTTTAGATTGGTCATACAGAGACGTGTGGGCTTTCCTTTTAACTTGCAAGGTGAAGTATTGCAGCCTTTATGATGAAGGATATACTTCAATTGGGAGCATATATGACACGGTTCCCAACTCACTATTATCCATTAGCAATTCTCCTGATAAATTCAAGCCAGCTTATTTACTTGCCGATGGAAGATTAGAGAGGGCAGGAAGGGCTAAAAAGTTATCTTCTACTTCTGGACAACTCCATGTTGATAGCAATGGCTTGACTGACCTGGATTTGCATAAAAACAGCATGCTCACGGCATCAATTATTGTCGTGGGAGATGAAATTCTGTTTGGCACTGTTGAGGATCAGTTGGGACCTTATTTGTGTAGGAAGCTGCATTCCGTTGGTTGGTCTGTTTTGCAACTTTCTGTCGTACACAACAATATAGATTCTGTGGCCGAAGAGGTTGAGCAGCGGAAATCTACATGTGATACGGTATTTATATATGGAGGTGTAGGTCCTCTGCATTCAGATGTTACCTTAGCAGGCATTGCAAAAGCTTTTGGTGTTCGTTTGGCTCCTGATGAAGAATTTGAAGAATATCTCAGGCACATTATTGGTGATCAGTGTACAGGTGACCGGAATGAGATGGCTCAATTGCCTGAGGGAATAACCGAATTATTGCATCATGACAAGTTGTCCATGCCCTTGATCAAGTGCCACAATATAATAGTTCTAAATGCAGCAAATGTTTCAGAGCTGGAAAACCAGTGGGACTGTTTGATTGAATTAACAAAATCTTGTGACATGCTTACATTGCTGGAACCATATGTATCAAAACAAGTAACAACAAAGCTATCAGATGTTGAAATTGCTCAACCACTATCCAAGCTTTGTCTTGAATATCCAGACCTATATATTGGGTGTTACCGCAAAGCCAGATATGGATCTGTCATAGTAAGTTTCAAAGGAAAGGACGAAGCACGCCTCGAAACTGCCATAAAAGCATTACACAACAAGTTTCAACCTGGTGCTTTCATTGAGATGAAGTAG 1737 0.4122 MEIDKAIRECDDQRLQTKYNNATYVIQRALALYSFRLLLHQDSTKHHHSHYYLPPPPSLSFLFINSNASSSNSLYHSLLLQEHSEFSGIIPAEDGPRRWSIGSSRYGIEEVAFSFNGGKDSTVLLHLLRAGYFLHKRGQSNANGDLKDFSMRTIYFESPCAFPEINSFTYDIAATYDLQIDTIRLDFKSGLEALLKENPIRAIFLGVRIGDPTAVGQEQFSPSSPGWPPFMRVNPILDWSYRDVWAFLLTCKVKYCSLYDEGYTSIGSIYDTVPNSLLSISNSPDKFKPAYLLADGRLERAGRAKKLSSTSGQLHVDSNGLTDLDLHKNSMLTASIIVVGDEILFGTVEDQLGPYLCRKLHSVGWSVLQLSVVHNNIDSVAEEVEQRKSTCDTVFIYGGVGPLHSDVTLAGIAKAFGVRLAPDEEFEEYLRHIIGDQCTGDRNEMAQLPEGITELLHHDKLSMPLIKCHNIIVLNAANVSELENQWDCLIELTKSCDMLTLLEPYVSKQVTTKLSDVEIAQPLSKLCLEYPDLYIGCYRKARYGSVIVSFKGKDEARLETAIKALHNKFQPGAFIEMK 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0110 578 Gene3D HUPs 101 307 IPR014729 -
Lal20g0110 578 Gene3D - 330 490 IPR036425 -
Lal20g0110 578 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 109 262 - -
Lal20g0110 578 PANTHER FAD SYNTHASE-LIKE 1 36 - -
Lal20g0110 578 PANTHER FAD SYNTHASE-LIKE 105 568 - -
Lal20g0110 578 Pfam Phosphoadenosine phosphosulfate reductase family 111 273 IPR002500 GO:0003824
Lal20g0110 578 SUPERFAMILY Molybdenum cofactor biosynthesis proteins 331 530 IPR036425 -
Lal20g0110 578 CDD PAPS_reductase 110 267 IPR002500 GO:0003824
Lal20g0110 578 SMART MoCF_biosynth_3a 335 496 IPR001453 -
Lal20g0110 578 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 1 36 - -
Lal20g0110 578 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 105 568 - -
Lal20g0110 578 Pfam Probable molybdopterin binding domain 336 431 IPR001453 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0110 Lal-Chr20 722274 732177 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0110 - - lja:Lj0g3v0206069.1 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0110 20 722274 732177 Lal20g0110 20 722274 732177 ECH
Lal11g1171 11 15437159 15444781 Lal20g0110 20 722274 732177 LSH