Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1171 ATGGAGATCGATAAAGCTATTACAGGGTGTGATGATCAAAGACTTCAGACCAAGTACAACAACGCCACTTATGTTATTCAGAGAGCTTTATCTTTGTATTCGATTGAGGAGGTTGCTTTCAGTTTCAACGGTGGAAAGGATTCAACGGTTTTGTTGCACCTACTCAGGGCCGGATATTTCTTGCATAAAAGAGGACAAATTAATGCCAATGGGGATCTAAAAGATTTCCCAATACGCACAATATATTTTGAGAGTCCTTGTACTTTCTCAGAAATCAACTCATTCACCTATGATACAGCTGCCACCTATGATTTGCAAATTGACACCATTCGCTTAGATTTCAAGTCTGGTTTGGAGGCTTTTCTAAAAGAGAATCCAATTCGAGCTATTTTCCTTGGTGTTCGAATTGGAGACCCTACTGCGCAAGGTCGTTGCTTAGTGACCAAGATGCCACATGTTCAAATCTTGGAAACCGTCTCTCCGCAAGCGGAGGTTGGTCAAGAACAATTCTCCCCTAGTTCACCTGGTTGGCCACCTTTCATGAGAGTGAATCCCATTTTAGATTGGTCATACAGAGACGTCTGGGCCTTCCTTTTAACTTGCAAGGTGAAGTATTGCAGCCTTTATGATCAAGGTTATACTTCAATCGGGAGTATATATGACACGGTTCCCAACTCATTATTGTCCATTAGCAATTCCTCCAATACATTCAAACCAGCTTATTTACTTGCCGATGGAAGATTAGAAAGGGCTGGAAGGGTTAAAAAATTATCTGTTACTTCTGGAAAACCTCATGCTGATAACAATGGCTTGACTAGCCTGGACTTGCATAAAAACAGCATGTTTACAGCATCAATTATTGCTGTGGGAGATGAAATTCTGTTTGGCACTGTTGAGGATCAGTTGGGACCTTATTTGTGTAGGAAGCTACATTCCATTGGTTGGTCTGTTTTACAACTTTCTGTTGTGCACAACAATGTAGATTCTGTGGCCGAAGAAGTTGAACGGCAGAAATCTACATGTGATATGGTATTTATATATGGAGGTGTAGGCCCACTGCATTCAGATGTTACCTTAGCAGGCATTGCAAAAGCTTTTGGTGTTCGTTTGGCTCCTGATGAAGAATTTGAAGAATATCTCAGGCATATTATTGGTGATCAATGTATCGGTGACCGGAATGAGATGGCTCAATTGCCTGAGGGCATAACCGAGTTATTGCATCATGACAAGTTGTCTGTTCCCTTGATCATGTGCCAAAATATAATAATTCTTAATGCAACAAATGTTTTAGAGCTGGAAAAGCAGTGGGAGTGTTTGATTGAATTAACAAAATCTAGTGACTTGCTTACATTGCTGGAACCATATGTATCAAAGCAAGTGACAACAAATCTTTCAGATGTTGAAATTGCTCAACCACTATCCAAGCTCTGTCTTGAATTTCCAGACCTATATATCGGGTGTTACCGGAAAACCAGATATGGTTCTGTTATAGTAAGCTTCAAAGGAAAGGACCAAGCACGCGTTGAATCTGCTATAAAAGCATTGCACCAGAAGTTCGAACCCGGTGCTTTCACCGCGATGAATTAG 1587 0.4077 MEIDKAITGCDDQRLQTKYNNATYVIQRALSLYSIEEVAFSFNGGKDSTVLLHLLRAGYFLHKRGQINANGDLKDFPIRTIYFESPCTFSEINSFTYDTAATYDLQIDTIRLDFKSGLEAFLKENPIRAIFLGVRIGDPTAQGRCLVTKMPHVQILETVSPQAEVGQEQFSPSSPGWPPFMRVNPILDWSYRDVWAFLLTCKVKYCSLYDQGYTSIGSIYDTVPNSLLSISNSSNTFKPAYLLADGRLERAGRVKKLSVTSGKPHADNNGLTSLDLHKNSMFTASIIAVGDEILFGTVEDQLGPYLCRKLHSIGWSVLQLSVVHNNVDSVAEEVERQKSTCDMVFIYGGVGPLHSDVTLAGIAKAFGVRLAPDEEFEEYLRHIIGDQCIGDRNEMAQLPEGITELLHHDKLSVPLIMCQNIIILNATNVLELEKQWECLIELTKSSDLLTLLEPYVSKQVTTNLSDVEIAQPLSKLCLEFPDLYIGCYRKTRYGSVIVSFKGKDQARVESAIKALHQKFEPGAFTAMN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1171 528 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 163 520 - -
Lal11g1171 528 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 1 144 - -
Lal11g1171 528 PANTHER FAD SYNTHASE-LIKE 163 520 - -
Lal11g1171 528 PANTHER FAD SYNTHASE-LIKE 1 144 - -
Lal11g1171 528 SMART MoCF_biosynth_3a 285 429 IPR001453 -
Lal11g1171 528 CDD PAPS_reductase 37 217 IPR002500 GO:0003824
Lal11g1171 528 Pfam Phosphoadenosine phosphosulfate reductase family 161 223 IPR002500 GO:0003824
Lal11g1171 528 Gene3D HUPs 3 257 IPR014729 -
Lal11g1171 528 Gene3D - 280 438 IPR036425 -
Lal11g1171 528 Pfam Probable molybdopterin binding domain 286 381 IPR001453 -
Lal11g1171 528 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 212 - -
Lal11g1171 528 SUPERFAMILY Molybdenum cofactor biosynthesis proteins 282 389 IPR036425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1171 Lal-Chr11 15437159 15444781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1171 - - lja:Lj0g3v0206069.1 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1171 11 15437159 15444781 Lal11g1171 11 15437159 15444781 ECH
Lal11g1171 11 15437159 15444781 Lal20g0110 20 722274 732177 LSH