Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0095 ATGGATGCAGAGGCTTCGAGTACTACTAACCACCTGCCTGGCTTTCTTCACCGGTCACTTCCTGCTGTTGTACCTACACTTTTGATTTCAATAGGATATGTTGACCCTGGAAAGTGGGCGACAATGGTTGAAGGTGGTGCACGGTTTGGGTTTGGTCTGATGCCTTTCATGCTTATTTTCAATTTTGCCGCAATCTTCTGTCAGTACATATCTGCAAGGATTGGTATAATCACAGGAAAAGATCTTGCTCAGTTTCTTTCTCCAAAGATTTGCAGCGATGAATATGATACATGGACATGCATGCTCCTTGGAATTCAAGCAGAAATTTCTATGATTATGCTAGATCTTAACATGATCTTGGGCATTGCACAAGGATTAAATCTTATTTTTGGGTGGGACTTGTTCGCTTGTGTCTTTTTAACTACTACTGGTGCTGTTTTTCATCTGCTTCTTGCTCTCCTCCTTGACATTAAGAAGGCAAAGATCCTAGGCCTGCTTGTGACAGGCTTTGTATTGATTTCTTTTGTACTTGGAGTACTTATCAATCAACCAGGAATTCCGTTATCCATGAATGGGGCACTAACAAAGTTGAATGGGGAGAGTGCATTTGTGCTAATGAGCCTTCTTGGAGCAACTCTTGTGCCTCATAACCTATACCTTCATTCCTCTGTTGTACAGTGGCATCAGGGACCAACTGATATTTCTAAGGAAGCCTTGTGTCATAACCATTTTTTGGCCATCTTATGCTTCTTCAGTGGTCTTTATTTGGTCAATAATGTGGTGATGAATGCCTCAGCAAATGAGTTCTATAGCACGGGTCTAGTTTTGCTTACTTTTCAGGACGCATTATCACCAATGGAACAGGTGTTGCGTAGCCCGATAGCTTTGTTTGCTTTTTTATTGATTCTGTTTCTTGCAAATCAAGCCACAGCATTAACTTGGAGTTTAGGTGGAGAAGTAGTTGTCCATGGTTTCTTAAGGTTGGACATTCCAGGTTGGCTTCATTATGCTACAATTAGAATGATTGCTGTTCTGCCTGCCCTTTATTGTGTTTGGAGTTATGGAGCTGAAGGGATTTATCAGCTAGTTATAGTCACTCAGGTTTTGGTAGCTTTGCAACTTCCATCTTCTGTGATTCCCCTTTTTCGAGTTGCTACATCAAGGTCAATAATGGGTGTACACAAGATGTCTCAGTTTATGGAACTTTTGGCCTTGGTCATATTTATTGGGGTGCTTGGCTTGAATATTGTCTTTGTGGTAGAAATGGTATTTGGAAGTAGTGAATGGGTGAGTGATTTGAGATGGAATGCAGGGAATGGTGTATCTTCCTCATATTTAATTCTTTATACTTCTGCTGTTGCATCAATATGTTTCATGCTTTGGTTAGCTGTCACACCTTTAAGATCTGCCAGTGCCCAGTTAGAAGCTCAGGTGTGGAACTGGGATACGCCAGAGACTGTATCAAACCCACCAGTTGATGGTGAGGAGTCATATTTAACTGGAACAAGGCATCATGGAGTTACGTCAGTTCAGGTGAAGGAACCAACACCAGCACCAACTCTGGCTCTAGCAAGGACCTTGGAGAACTCAGACGTAACAGTTCCTAGTTTTCATCATGATATACCTGAAACTATAATGGAGCCTGATCTACATGTGAATGCTGAAAAGGAGACTCAATCTACTACATCATTTCCTAGTTCCCCTAAATCTCTTGCTAAGGTGTTAGCTTCCACATCAGAGTCAGAGGCAGTATCAACTGTAGTTGATGAAGTTTCTGATTCTAGATCTGAGGACACCAAATGTGTAAAAATAGAAATAAGTGCCCCTGTTGGTAAGAGTGTGGAGTTTGTGGGAGATTCAAATGCTGAGAGGGATTATGATGATGATGTTGACTCATGGGAAATTGAAGAATCATCCAAAGTGGTCTCAGCAAGTGCCCCGTCATCAACATCAGATGGCCCTGCATCATTCAGGAGTCTTAGTAGGAAAAGTGATGAAGGTGGGAATAGCATTGGAAGTCTTTCGAGGTTAGCGGGCTTAGGGCGCGCAGCAAGGCGTCAGCTAGCTGCTGTTCTTGATGAATTCTGGGGACAACTTTATGATTTCCATGGGCAAGCAACCCGGGAAGCAAAGGCTAAGAAACTTGATGCTTTGCTGGGAGGGGGAATTGATTCAAGATCCACTGGTTCCTTGCAGCAGGTGGATGCATGTGGAAAGGAATATTCTGAATACTTAGCATCTGTTGGAGGTAGAGCTTCTGACACTTTAATGAATTCCGGTCTACATGACTCTTTAAAGCAGCCTAGGATGCAAAGTAGTTTAGAGTCTTCATATGGCCTTCAAAGGAGTTCGTCCTCAATTCAGGCTCAATTATTAGATGCATATGTGCAGTCACAGAACTCCAGCCGCAATCTCCTTGATTCTGGTGAGAGGCGCTATTCTAGTGTGCGCAATCTGCCTTCATCCGAGGCTTGGGATTATCAGCCGGCTACCATTCATGGTTATCAGTCTGCATCTTATCTTAACCGGGTTAGTAAAGACAGAAACTTTGATAACTTGAATGTTTCGATGGAGTTATCATCACTGAAATCCCCTTCCACGGATACAAATTACAGAGGTTCACTTACATTTGCTTTGGGGAGAAAGTTGCATAATGGTGCAGGTATAGGCCAACCCCCAGGGTTCCAACACGTAGCTGTCTCTAGAAATTCTCAATTGCAATCTGAGAGGTCCTATTATGATTTTGGCACATCAGTATCTGCAGATAATGCAGTCAGTTCCATTAATAACAAGAAGTACCACAGCTTACCAGACATTTCGGGATATGCCATCCCCCGCAGGACTGGTTATGTATCTGAGAAAAATGCTCCGTGGAATGGGTCTGTTGGATATGGATCTTCTGCAAGTAAAACATATGAACCATCATCATATGCAAATTCTGGATCAAGAATAGGACATCCTTTGGCCTTTGATGAACTCTCTCCATCAAAGGTTTACCGGGAGGCACTCTCTTCACAGTTGAGTTCTGGTTTTGATACTGGATCTCTATGGTGTAGACAACCTTTTGAGCAGTTTGGTGTTGCTGAAAAATTTAATAATGTTGCAATGGACGGTGTTGGAATTAGGCCTAATGCTACTGCTCAAGAAACTACTTTTGTAGATATAGAGGCGAAACTTCTTCAGTCGTTTAGACTTTGCATTGTGAAGCTCTTAAAACTTGAAGGGTCTGATTGGTTATTTAGACAGAACGATGGAATCGATGAGGATCTGGTTGATCGCGTGGCAGCAAGGGAGAAATTTCTTTATGAAATTGAAACTAGGGAGATGAATCAGGTCGCTCATATGGGTGAAACTCAATATTTTTCTTGTGACGGGAAACCTGGTTCTTCAATAAAGAATGATGATGCAAACTCCTCTAGTTTTTCAGTTTCCTCAGTTCCTAATTGTGGGGAGGGGTGTATTTGGAAATCAGACTTAATAATAAGCTTTGGAGTGTGGAGTATCCACCGTATTCTTGACCTCTCACTTATGGAAAGCCGGCCAGAACTTTGGGGGAAATACACCTATGTACTCAATCGTCTCCAGGGCATCATTGATCCAGCTTTTTCCAAGCCTCGTAGTTCCATGGTCCCATGCTTTTGCCTTCAAGTTCCTGTGTCACATCAGCAAAAGTCAAGCCCCCCTCATTCCAACGGAATGCTGCCGCCAACTTCAAAACCAGGCCGAGGAAAATACACAACCGCATCGACGTTGCTTGACGTGGTCAAGGATGTGGAAATTGCAATCTCTACCCGGAAAGGACGTAGTGGAACCGCAGCCGGTGATGTTGCTTTCCCAAAGGGAAAAGAGAATCTGGCGTCTGTTCTCAAACGATATAAGCGGAGGTTATCATACAAACCTGCCGGAACCCATTAA 3915 0.4294 MDAEASSTTNHLPGFLHRSLPAVVPTLLISIGYVDPGKWATMVEGGARFGFGLMPFMLIFNFAAIFCQYISARIGIITGKDLAQFLSPKICSDEYDTWTCMLLGIQAEISMIMLDLNMILGIAQGLNLIFGWDLFACVFLTTTGAVFHLLLALLLDIKKAKILGLLVTGFVLISFVLGVLINQPGIPLSMNGALTKLNGESAFVLMSLLGATLVPHNLYLHSSVVQWHQGPTDISKEALCHNHFLAILCFFSGLYLVNNVVMNASANEFYSTGLVLLTFQDALSPMEQVLRSPIALFAFLLILFLANQATALTWSLGGEVVVHGFLRLDIPGWLHYATIRMIAVLPALYCVWSYGAEGIYQLVIVTQVLVALQLPSSVIPLFRVATSRSIMGVHKMSQFMELLALVIFIGVLGLNIVFVVEMVFGSSEWVSDLRWNAGNGVSSSYLILYTSAVASICFMLWLAVTPLRSASAQLEAQVWNWDTPETVSNPPVDGEESYLTGTRHHGVTSVQVKEPTPAPTLALARTLENSDVTVPSFHHDIPETIMEPDLHVNAEKETQSTTSFPSSPKSLAKVLASTSESEAVSTVVDEVSDSRSEDTKCVKIEISAPVGKSVEFVGDSNAERDYDDDVDSWEIEESSKVVSASAPSSTSDGPASFRSLSRKSDEGGNSIGSLSRLAGLGRAARRQLAAVLDEFWGQLYDFHGQATREAKAKKLDALLGGGIDSRSTGSLQQVDACGKEYSEYLASVGGRASDTLMNSGLHDSLKQPRMQSSLESSYGLQRSSSSIQAQLLDAYVQSQNSSRNLLDSGERRYSSVRNLPSSEAWDYQPATIHGYQSASYLNRVSKDRNFDNLNVSMELSSLKSPSTDTNYRGSLTFALGRKLHNGAGIGQPPGFQHVAVSRNSQLQSERSYYDFGTSVSADNAVSSINNKKYHSLPDISGYAIPRRTGYVSEKNAPWNGSVGYGSSASKTYEPSSYANSGSRIGHPLAFDELSPSKVYREALSSQLSSGFDTGSLWCRQPFEQFGVAEKFNNVAMDGVGIRPNATAQETTFVDIEAKLLQSFRLCIVKLLKLEGSDWLFRQNDGIDEDLVDRVAAREKFLYEIETREMNQVAHMGETQYFSCDGKPGSSIKNDDANSSSFSVSSVPNCGEGCIWKSDLIISFGVWSIHRILDLSLMESRPELWGKYTYVLNRLQGIIDPAFSKPRSSMVPCFCLQVPVSHQQKSSPPHSNGMLPPTSKPGRGKYTTASTLLDVVKDVEIAISTRKGRSGTAAGDVAFPKGKENLASVLKRYKRRLSYKPAGTH 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0095 1304 MobiDBLite consensus disorder prediction 637 669 - -
Lal20g0095 1304 PRINTS Natural resistance-associated macrophage protein signature 103 129 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal20g0095 1304 PRINTS Natural resistance-associated macrophage protein signature 205 228 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal20g0095 1304 PRINTS Natural resistance-associated macrophage protein signature 307 326 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal20g0095 1304 PRINTS Natural resistance-associated macrophage protein signature 335 352 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal20g0095 1304 PRINTS Natural resistance-associated macrophage protein signature 367 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal20g0095 1304 Pfam Natural resistance-associated macrophage protein 39 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal20g0095 1304 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 15 1203 - -
Lal20g0095 1304 PIRSF EIN2 1 1304 IPR017187 GO:0009873
Lal20g0095 1304 MobiDBLite consensus disorder prediction 638 669 - -
Lal20g0095 1304 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 15 1203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal20g0095 1304 Coils Coil 1304 1304 - -
Lal20g0095 1304 MobiDBLite consensus disorder prediction 1221 1242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0095 Lal-Chr20 606973 615443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0095 1 1304 Miscellaneous Gene Families AT5G03280 51.949 0.0 1241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0095 - K14513 cam:101495756 1833.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0095 20 606973 615443 Lal20g0095 20 606973 615443 ECH
Lal1g1813 1 20457115 20461258 Lal20g0095 20 606973 615443 LSH