Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1813 ATGCTCCTTGGAATTCAAGCAGAAATTTCTGTGATTATGCTTGATCTTAACATGATCTTGGTCATGGCACAAGGATTGAATCTTATTTTCGGGTGGGACTTGTTCACCTGTATCGTTTTAACTGCTACCGGTGCTGTTTTTCAACAACTACTCGCTCTTCTCCTTACATTTCTAAGGAACATCTTATGCATCTTCAGTGGTCTTTATTTGGTCAATAATGTCGTGATGAATGCCCCGGCAAATGAGTTCTACAGTACTGATCTAGTTTTGCTTACTCTTCAGGATGCATTATCGCTAATCGAACAGGTGTTGCATAGCCCGATAGGTTTACTTGTTTTTTTATTGATTTTGTTTCTTGCAAATCAAGTTAGAGCATTAACTTCGAGTTTTGGCGGAGAAGTAGTTGTGCATGGTTACTTAAGATTGTATATTCCAGGTTGGTTTCATTATGCTATAGTAAGAGTTATTGCCATTCTGTCTGCCATTTATTGTGCTTGGAGTTCAGGAGCTGAAGGGATTCATCAGCTACTTATATTCACTCAGGTTTTGGTAGTTTTGCAACTTCCATCTTCTGTGATTCCCCTTTTTCAAATTGCTACATCTAAGTCAATAATGGGTGTACAGAAGATCTCTCAGTTTGTGGAACTTTTGGCATTGGCCATATTTATTGGGATGCTTGCCTTGAACATTGTCTTTGTGGTAGAGATGATGTTTGGAAGTAGCGAATGGATGGGTGATTTGAGATGGAATGTGGGGAATGGTGTATCTTTCTCGTATTTAGTTCTTTTTACCACTGCTCTTGCATCAATATGTTCCGTGCTTTGGTTAGCTGCCACACCCTTAAGATCTGCTAGTGTCCAATTAGATGCTCAGGAGTGGAACTGGGATACGCCAGCGACTGTATCAAAACCGGAAGTTGATGGCGAGGAGTCAAATTTAACTCCGAGAAAGTATCTTGGAGTTACGTCGGTTCAGGTGAAGGAACCAGAACCAAAACTTCCTAGTCCTCCCAAGTCTCTTGATAAGGAATCAGCTAGCACATCAGAGGCAGAGGCAGTATCAACTGGAAGGCGTCAACTAGCTGCTGTTCTTGATGAATTTTGGGGAACCAACCCTGGAAGCAAAGGCTAA 1131 0.4129 MLLGIQAEISVIMLDLNMILVMAQGLNLIFGWDLFTCIVLTATGAVFQQLLALLLTFLRNILCIFSGLYLVNNVVMNAPANEFYSTDLVLLTLQDALSLIEQVLHSPIGLLVFLLILFLANQVRALTSSFGGEVVVHGYLRLYIPGWFHYAIVRVIAILSAIYCAWSSGAEGIHQLLIFTQVLVVLQLPSSVIPLFQIATSKSIMGVQKISQFVELLALAIFIGMLALNIVFVVEMMFGSSEWMGDLRWNVGNGVSFSYLVLFTTALASICSVLWLAATPLRSASVQLDAQEWNWDTPATVSKPEVDGEESNLTPRKYLGVTSVQVKEPEPKLPSPPKSLDKESASTSEAEAVSTGRRQLAAVLDEFWGTNPGSKG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1813 376 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 60 297 - -
Lal1g1813 376 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 1 52 - -
Lal1g1813 376 MobiDBLite consensus disorder prediction 340 354 - -
Lal1g1813 376 MobiDBLite consensus disorder prediction 324 356 - -
Lal1g1813 376 Pfam Natural resistance-associated macrophage protein 68 211 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal1g1813 376 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 60 297 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal1g1813 376 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 52 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1813 Lal-Chr1 20457115 20461258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1813 1 71 Miscellaneous Gene Families AT5G03280 43.836 3.08e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1813 - K14513 gmx:100801190 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1813 1 20457115 20461258 Lal1g1813 1 20457115 20461258 ECH
Lal1g1813 1 20457115 20461258 Lal20g0095 20 606973 615443 LSH