Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0063 ATGAGAAACGAGTCACAGAATATATCCAAGTTGCAATCATCTTGGCTAAAATTAGCTATGAGGAAGTGGCTTAATAGGAGTAGCGGTCACAAGCTTCTAAGAGAGGGGTTGTTGATGGATTCTACAAATGGAATGAGAGGCTCAGAACTTAGGAATGAAGAAACGCACGTTCCTGTCACTGATGCTCTGGACCTTAGGATGTTCGTTGGTACATGGAATGTTGGAGGGAAGTCACCAACTGATACTTTGAACTTAAGGGATTGGTTGAAGTCTCCTTCACCACCTCATATTTATGTTATTGGGTTCCAAGAAATTGTTCCTCTAAATGCGGGGAACGTGATTGGGCCAAGGGATAGTGCCCCAGTGTCAAAATGGGTGGGCCTGATTAGCGAAGTGTTGAACAACAACAATACGAAGCCATGTGATGAGAGAGGGTATTGGGTAGCAGGAAGGAAGCAAATGGTTGGTATATTCTTGTGCGTGTGGGTACGCGCTGATCTTTACACCTATGTTAGCAATATTAAGGTATCATGCATTGGTAGAGGCATCATGGGTTATCTTGGAAATAAGGGTTCAATATCAATTAGCATGAGATTGTCCCACACTACGTTCTGCTTTGTTTGCACTCACTTGGCCTCAGGAGAAAAAGATGGTGATGAGATTCGAAGAAACTTGGACGTTTCCGAAATCTTAAAGAAAACTAAATTTCCTCGCTCATTTAAATCTCATTATCATCCACAAAACATACTTGAACATGATAATGTTATTTGGCTTGGAGACTTGAATTATCGACTTGTTGCTGGTTATAAAGATACACATGAGCTTTTAAAGATGAATAATTGGCAGGCACTATTGGAAATGGACCAGCTAAGGATAGAGCAGAAAGCTGGTAGAGTATTCAAAGGTTGGAATGAAGGAGGGATATACTTTGCCCCAACTTACAAATACTTGGCCAATTCTGACAACTATGTTCCCCAAACCTCCAAATCCAAGGAAAAAAAGAGAACTCCTGCTTGGTGTGATAGGATTCTATGGAAAGGGGAAGGCCTAAAACAAATGTGGTATGTTAGAGGAGAGTCCAAATTCTCAGATCACAGGCCTGTGTACTCATTATTCTCACTTCAACTAGACTTGACAAGCAAGCATCTCACAAATGCTGCCACCACAGTAAACATAAGGTCCTGTCCCTCTAAGACATTGACAAATGCTGCATTTTCATCAACTTGTGCTTCTAAAGTACAAGCAGAAGAACAGATCTTGTTACTTGGAAGGGTGCAAGTTACATAG 1287 0.4126 MRNESQNISKLQSSWLKLAMRKWLNRSSGHKLLREGLLMDSTNGMRGSELRNEETHVPVTDALDLRMFVGTWNVGGKSPTDTLNLRDWLKSPSPPHIYVIGFQEIVPLNAGNVIGPRDSAPVSKWVGLISEVLNNNNTKPCDERGYWVAGRKQMVGIFLCVWVRADLYTYVSNIKVSCIGRGIMGYLGNKGSISISMRLSHTTFCFVCTHLASGEKDGDEIRRNLDVSEILKKTKFPRSFKSHYHPQNILEHDNVIWLGDLNYRLVAGYKDTHELLKMNNWQALLEMDQLRIEQKAGRVFKGWNEGGIYFAPTYKYLANSDNYVPQTSKSKEKKRTPAWCDRILWKGEGLKQMWYVRGESKFSDHRPVYSLFSLQLDLTSKHLTNAATTVNIRSCPSKTLTNAAFSSTCASKVQAEEQILLLGRVQVT 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0063 428 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 143 419 IPR045849 GO:0004445|GO:0046855
Lal20g0063 428 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 33 139 IPR045849 GO:0004445|GO:0046855
Lal20g0063 428 SUPERFAMILY DNase I-like 60 378 IPR036691 -
Lal20g0063 428 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 143 419 - -
Lal20g0063 428 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 33 139 - -
Lal20g0063 428 Gene3D Endonuclease/exonuclease/phosphatase 45 402 IPR036691 -
Lal20g0063 428 SMART i5p_5 63 380 IPR000300 GO:0016791|GO:0046856
Lal20g0063 428 Pfam Endonuclease/Exonuclease/phosphatase family 70 365 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0063 Lal-Chr20 416131 424036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0063 43 346 Acyl Lipid Metabolism Gene Families AT2G43900 33.528 3.88e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0063 - - vun:114176714 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1848 1 20756767 20763603 Lal20g0063 20 416131 424036 LSH