Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1848 ATGATGAGAAACAAGGCAAACAAGATAAGCAAGTCATCATGGCCTAAATTAGCTGTGAAGAAGTGGCTTAATAGAAGGAGCAGTGCTGACAAGTTTGTAAAAGAGGGGTGGTTGATGTATTCCAAAAATGGAATGAAAGCTTGGGAACTTGGGAATGAGGCAACGCACGTTCATGTCACTAATGCTATGGACCTTAGGATGTTTGTGGGAACATGGAATGTTGGAGGGAAATCACCAAATAATGGTTTGGACTTAAGGGATTGGTTGAAGTCTCCTTCACCAGCTCATATTTATGTTATTGGGTTCCAAGAAATTGTTCCACTAAATGCAGGGAACGTGTTTGGGCCGGAGGACAGTGGCCCAGTATCAAAATGGATGGGCCTTATTAGTGAGACCTTGAACACAACCACCACCACCACCTATGATAGTAGAGGTGGGCCTGATAAACAAGGAAGCCCAAAGCCCAGGCCCATTTTATCTTTAGAAGGCAATTTGGATAATGATGAGAGAGGGTATTGCTTAATAGGAAGCAAGCAAATGGTTGGTATATTCTTGTGCGTGTGGGTACGCGCTGATCTTTACAATCATGTTACCAATATGAAAGTGTCTTGTGTTGGTAGAGGCATCATGGGCTATCTTGGAAATAAGCATATTGATTGCCAAGGTCTAAGACCTAATGCACCAAGGCCGAGTCCTCAATTTGTCAAGGGTTCAATATCAATTAGCATGACATTGTATCAAACCACATTCTGCTTTGTTTGCACTCACTTGGCCTCTGGAGAGAAAGATGGTGATGAGAACAGAAGAAACTTAGATGTATCAGAAATCTTGAAGAAAACTAAATTTCCTTGTTCATTTAAATCTCCTTCTTACCCTCAAAGCATACTAGAACATGATAATGTTATTTGGCTTGGTGACTTAAATTATCGACTTGTTGCTGGTTATGATGATACACATAAGCTATTAAAGAAGAATAATTGGCAGGCACTATTAGAAAAAGATCAGCTAAGGATAGAGCAGAAAGCTGGTAGAGTATTTAAAGGGTGGAATGAAGGGGAGATATACTTTGCCCCAACTTACAAATACTTAGCCAATTCTAACAACTATGTTGCCCAATCCTCCAAATCTAAGGAAAAAAGGCGAACTCCTGCTTGGTGTGATAGGATTCTGTGGAAAGGGGAAGGGCTAAATCAGATTTGGTATGTTAGAGGAGAATCCAAGTTCTCAGATCATAGGCCAGTGTACTCACTATTCTCACTTGAACTAGACTTGATGACTAAGTATCTTACACCTTCTTCTGCTACCAAAAGGGCATTGACAAATGCTGCATTATCATCAACTTGTTGTGCTTCTAAAGTACAAGCAGAAGAGCAGCTTTTGTTACTAACAAGGCTGCAAAGTTGTATAGACATTGCAACTAGGTTCTGA 1428 0.4048 MMRNKANKISKSSWPKLAVKKWLNRRSSADKFVKEGWLMYSKNGMKAWELGNEATHVHVTNAMDLRMFVGTWNVGGKSPNNGLDLRDWLKSPSPAHIYVIGFQEIVPLNAGNVFGPEDSGPVSKWMGLISETLNTTTTTTYDSRGGPDKQGSPKPRPILSLEGNLDNDERGYCLIGSKQMVGIFLCVWVRADLYNHVTNMKVSCVGRGIMGYLGNKHIDCQGLRPNAPRPSPQFVKGSISISMTLYQTTFCFVCTHLASGEKDGDENRRNLDVSEILKKTKFPCSFKSPSYPQSILEHDNVIWLGDLNYRLVAGYDDTHKLLKKNNWQALLEKDQLRIEQKAGRVFKGWNEGEIYFAPTYKYLANSNNYVAQSSKSKEKRRTPAWCDRILWKGEGLNQIWYVRGESKFSDHRPVYSLFSLELDLMTKYLTPSSATKRALTNAALSSTCCASKVQAEEQLLLLTRLQSCIDIATRF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1848 475 MobiDBLite consensus disorder prediction 136 158 - -
Lal1g1848 475 SMART i5p_5 63 426 IPR000300 GO:0016791|GO:0046856
Lal1g1848 475 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 236 460 IPR045849 GO:0004445|GO:0046855
Lal1g1848 475 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 33 216 IPR045849 GO:0004445|GO:0046855
Lal1g1848 475 SUPERFAMILY DNase I-like 59 422 IPR036691 -
Lal1g1848 475 Pfam Endonuclease/Exonuclease/phosphatase family 70 411 IPR005135 GO:0003824
Lal1g1848 475 Gene3D Endonuclease/exonuclease/phosphatase 48 444 IPR036691 -
Lal1g1848 475 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 33 216 - -
Lal1g1848 475 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 236 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1848 Lal-Chr1 20756767 20763603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1848 36 422 Acyl Lipid Metabolism Gene Families AT1G65580 28.440 1.90e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1848 - - vun:114176714 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1848 1 20756767 20763603 Lal1g1848 1 20756767 20763603 ECH
Lal1g1848 1 20756767 20763603 Lal20g0063 20 416131 424036 LSH