Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0002 ATGGCGCCTAGTCGGAAAAAGGGCATAGGTAAAGCAGCAACCGCCGCCGCTGCCGCCGCTTGCCGCCAATGGAAGGTTGGCGATCTTGTGCTCGCCAAAGTGAAGGGCTTTCCTGCTTGGCCTGCCACTGTAAGTGATCCAGAGAAGTGGGGTTATTCCAAGGATTCAAAGAAAGTGCACGTTTACTTCTTTGGAACCCAGCAAATAGCTTTCTGTAATCCTGCTGATGTTGAAGCATTTACTGAAGAGAAGAAACAGTCTCTTGTCAAACGTCGAGGAAAGGGTGCTGATTTTGTTCGTGCAGCACAGGAGATTATTAATAGCTATGAAAAATTAAAAGGAGAGGCCCAAGTTAACGAAACCAACTCTGGCGGTGAAGTTGCTAATGCAAATGTCTCATATCTAGTTGAAGAATCTGCCAACTTAGGGTTAAAGGATAAGACAGATGCTCCTTTGACACTCGGTTCAATAACAAATTCTTCGAATTCTGGCAAGCATGATGAGCTAGTTTGTGCAACTGAGGATGACTTAGCTGTTGAACCGAGGGATGAATCTTATAATAAAGAGCCATCATTGGAGAAACCTATTGCTAACCCTGTTGTAACTATGAGTGTAAAATCATCTCTGCCCGTTACTCATGCTCCTCGAAAAAGATCTGCAGACTTGAGCCTACAGATCTGTACAACCCAGAGAAATGCATCATTTCATAGGCCACAGGTCCAAAACTTTGTTGGACCTTTTAGTGATGGTGGAAATAGTGCTGGTAACATATCAGTTGATGTTACCCAGAATGTGTCTTTGAGAAGGAATAAACATACCAGGAAATCACATGATCTTCTTGGTTGTGTTGATGCTGATTCATCAGCATTTGCCTCCAATGGTAGCATGAAGGGCAAGGGTTCTGAAATTCTTACAGTCAATTCGGAGGCCTTTAGCCCAGATGATGGAAGTACAATAGATTCTAATTTTAGACGTGAATACTCTGAGACTATGGAGAGCCCCAAAGGTGATGTTGGGTTGAATGGAGGGCTTGATCTTAAAATAAAGGCTGTAATTAATAAGAAGAAAAGAAAGTCAAACATGAAGAAGGAAACTAAGGATGCTGTGAAGCCAACCATTAGACTAGAGGAGGAGGCTGGTTCTCAAAATGGCAGTCAAAGTTCGCAGAACGTGTGTGGATATTCAAAAGAGAGGTGCTCTGATCAAGAAGGAGATGAACATTTGCCCCTGTTAAAACGAGCGAGAGTCAGAATGGGTAATGCATCATCCATACAAGATCAGGAGAAAAGCTGTAAGGAAGAGATCACTATCTCTCCGCTGCAAATAGTCACATCCTTGAATTGTGAAAGTGGTACTCTTGTTTATGTAGACTTACCAGCACAGAATGGAGCCATGGGTAACATTTTTCCTTCAAAGTTATTAGCTCCAAGTTCTGAAACTGGGTATCAGATTTGTAAGATTGAGAAAGATGAAATGCTTGGCTGCTCCTTGGATGGCGAAGCTGCTTTACCTCCATCTAAACGCCTCCATCGTGCTTTAGAAGCTATGTCTGCCAATGCTGCTGAAGATGGTCAAGCTTGCATGGAATCATCATCCTCTGTAATGATTTCAACAGAGAACAAGTTATCTAAAGAAGTAAATAAGCAATTCACCAAGTTTGAACATCATGGACCTGGCAAGGATGTCCTCCAGTCTACTAGAGACCAAGTTGGTGGTGAAGATATGGTTGATTCTGTGGTTGGTCAGACTGATAAAACTGGTTCAGAATTTCAGTTACATGGAAAAGTTTCTCCTAATGTTCATGTGAAATATTGTGAAGTTGGAACCAATCAAGATTCACCAGGTGCACCATTGCCACCAAATGATGATAACAGTATCAGACCTGACAACCATTCAAATGCATCTGATACATCACAACAAAATGGAATAAATCTTGATCCTATGGAATGTGCTTGTGAAGGAGGTAAATTGTTACCTCAAAATATTATTGATGTGCCTCAGGACAAGGTTGTTGTCTGTGAGGGTTCTCGGTGCTTAAAGCAAGCAGTTGGTGACAGCAGCAAAGTTGATGACATATGTAAAGTTGATGACATGTGTGAGGTTGTGAAAGAGGTAATATTTAAAGGACAGAAGGAGGATACGAGTTCTGTCTCAATATCAAATGTTTGTTCAGGTGAAAAGGGTACTTTAGGAATCCAGTCACAAGGATCACCTCCAAATACGTCAGTTTGTAATGTTTCTACATCAGACAGTAGTAATATCCTTCAAAATAGAAGTTGTAGCCCTGATGTACACCAGAAGCACACTTTATCTGGTCCTGTTGATGGATGGAAAGATGGTTTTGTGGAAAATCAAGGGCCAAGATTGATGGGTAAGTCAACTGAAGCAAGACACGCTGCTTTGGTATACTTTGAAGCAATGCTTGGGACATTGAAAAGGACAAAGGAAAGTATTGGTCGAGCGACACGTATAGCTATTGACTGTGCAAAGTTTGGCATTGCAGCTAAGGTACAGGATGTATATAGAAGGTTGATTGGAGACTTTTGTTTGATGATATTAACCATAGTGTGTCTAGGTGGAATTTGGATTCCTATAGGAGAGGTTTTGGAAATTCTTGTCCACAATCTGGAAACTGAGTCAAGCCTGTGCCGGAGGGTCGATCTGTTTTTTCTAGTTGATTCTATTGCTCAATGTTCTCGCGGGTTGAAAGGTGATGTTGGTGGAGTATATCTCTCTGCTATGCAATCAGTCCTGCCGCGCCTTGTGTCTGCTGCTGCTCCTGCTGGAAGTGCTGCTCAAGAAAATCGCAGGCAGTGTCTTAAGGCAAGTGTCTATTCACGACGTACATTAAGAACAGAGAGGCCTTTTGATGACCCTGTTAGAGAAATGGAGGGTATGCTTGTTGACGAATATGGAAGCAACTCAAGCTTTCAGCTACCTGGATTTTGCATGCCCCAAATGCTTAAAGATGAAGATGAAGGGAGTGATTCTGATGGAGCGAACTTTGAGGCTGTCACGCCTGAGCATGATTCTGAAACTCATGATATGCAAGATACGTGTCATGTAATTGTAAAGCGCAGGCATGTATTGGAAGATGTTGATGGTGAACTTGAAATGGAAGATGCTGCCCCCTCTGTTGATATTAGATTGAATTCAACTTATAATGTTGGAGGAAATGCCACACCATTCGAGAAGAATACTCCTCTGCTACAGGGGCGACCATCTACCCCACCCCCACCATCATCTCCTCCTCCTCCACCACCACTTCCTCCTCTACCTCCTTTACCTCCACCCCCACCTCCCCCTGCATTGCATCTCATGTCAGCTACCCCCAATCCATATCATGCTGCAGTTGATTCAAAATCACAGACTGTGAAAGACAACATGCTCCTCTCCATAGCTGAACCATTGGCTGCACCAAGAAATAGCCAACTTATAAATGATGCAGTGCAGCACAACATGCAGATGCAGATACCTAACTCCACATGCTCTTTTAATTCCTTCCCGTTACAATCATCGGCTAATTTCCGGAATTCTGATGGTGTTAGTATCCATAGTAAAGGTTATCCATTACCGCCCCCTCACCATATCCCATCCAATCAATTTTCTTTTGTTAATGGGGAATGTGTGAAGCCTCCTCTGAGGGACGTTCCTCCACCACCCCCTTCATTCTCCAATAACCACTTTGTGCAGAGCAATAGCATGGAAAGAGGGAATTTCTATAACAATCACGAGAGATTAAGGCCACCTCCTCCATATAATAATCATGAGAGATGGAATGTTCCTGGACCATATTCTGGTCCTCATTATCATCATGATAGAGGAGGCCCGCCAGCTCCTTATGGTTGTCATCCATGTGAACCAACTAGATTACCAGGCCATGCGTGGAGGTTTCCTCCTCCGCCAACAGATGACAAGGACTACATGCCTTTTAGACAACCCTATGAAGATGCCCAGGATTCTGGCCTCCAAGTTGAACATGAGTCACCAAGAAATGAAAGCTAA 4005 0.4312 MAPSRKKGIGKAATAAAAAACRQWKVGDLVLAKVKGFPAWPATVSDPEKWGYSKDSKKVHVYFFGTQQIAFCNPADVEAFTEEKKQSLVKRRGKGADFVRAAQEIINSYEKLKGEAQVNETNSGGEVANANVSYLVEESANLGLKDKTDAPLTLGSITNSSNSGKHDELVCATEDDLAVEPRDESYNKEPSLEKPIANPVVTMSVKSSLPVTHAPRKRSADLSLQICTTQRNASFHRPQVQNFVGPFSDGGNSAGNISVDVTQNVSLRRNKHTRKSHDLLGCVDADSSAFASNGSMKGKGSEILTVNSEAFSPDDGSTIDSNFRREYSETMESPKGDVGLNGGLDLKIKAVINKKKRKSNMKKETKDAVKPTIRLEEEAGSQNGSQSSQNVCGYSKERCSDQEGDEHLPLLKRARVRMGNASSIQDQEKSCKEEITISPLQIVTSLNCESGTLVYVDLPAQNGAMGNIFPSKLLAPSSETGYQICKIEKDEMLGCSLDGEAALPPSKRLHRALEAMSANAAEDGQACMESSSSVMISTENKLSKEVNKQFTKFEHHGPGKDVLQSTRDQVGGEDMVDSVVGQTDKTGSEFQLHGKVSPNVHVKYCEVGTNQDSPGAPLPPNDDNSIRPDNHSNASDTSQQNGINLDPMECACEGGKLLPQNIIDVPQDKVVVCEGSRCLKQAVGDSSKVDDICKVDDMCEVVKEVIFKGQKEDTSSVSISNVCSGEKGTLGIQSQGSPPNTSVCNVSTSDSSNILQNRSCSPDVHQKHTLSGPVDGWKDGFVENQGPRLMGKSTEARHAALVYFEAMLGTLKRTKESIGRATRIAIDCAKFGIAAKVQDVYRRLIGDFCLMILTIVCLGGIWIPIGEVLEILVHNLETESSLCRRVDLFFLVDSIAQCSRGLKGDVGGVYLSAMQSVLPRLVSAAAPAGSAAQENRRQCLKASVYSRRTLRTERPFDDPVREMEGMLVDEYGSNSSFQLPGFCMPQMLKDEDEGSDSDGANFEAVTPEHDSETHDMQDTCHVIVKRRHVLEDVDGELEMEDAAPSVDIRLNSTYNVGGNATPFEKNTPLLQGRPSTPPPPSSPPPPPPLPPLPPLPPPPPPPALHLMSATPNPYHAAVDSKSQTVKDNMLLSIAEPLAAPRNSQLINDAVQHNMQMQIPNSTCSFNSFPLQSSANFRNSDGVSIHSKGYPLPPPHHIPSNQFSFVNGECVKPPLRDVPPPPPSFSNNHFVQSNSMERGNFYNNHERLRPPPPYNNHERWNVPGPYSGPHYHHDRGGPPAPYGCHPCEPTRLPGHAWRFPPPPTDDKDYMPFRQPYEDAQDSGLQVEHESPRNES 1334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0002 1334 MobiDBLite consensus disorder prediction 1057 1117 - -
Lal20g0002 1334 MobiDBLite consensus disorder prediction 1072 1107 - -
Lal20g0002 1334 MobiDBLite consensus disorder prediction 1294 1334 - -
Lal20g0002 1334 MobiDBLite consensus disorder prediction 625 642 - -
Lal20g0002 1334 Gene3D - 15 120 - -
Lal20g0002 1334 SUPERFAMILY Tudor/PWWP/MBT 21 124 - -
Lal20g0002 1334 MobiDBLite consensus disorder prediction 607 642 - -
Lal20g0002 1334 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 537 - -
Lal20g0002 1334 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 535 839 - -
Lal20g0002 1334 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 867 941 - -
Lal20g0002 1334 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 942 1319 - -
Lal20g0002 1334 SMART PWWP_4 24 81 IPR000313 -
Lal20g0002 1334 MobiDBLite consensus disorder prediction 987 1015 - -
Lal20g0002 1334 Coils Coil 1332 1334 - -
Lal20g0002 1334 MobiDBLite consensus disorder prediction 378 395 - -
Lal20g0002 1334 MobiDBLite consensus disorder prediction 375 395 - -
Lal20g0002 1334 PANTHER PWWP DOMAIN PROTEIN 942 1319 - -
Lal20g0002 1334 PANTHER PWWP DOMAIN PROTEIN 535 839 - -
Lal20g0002 1334 PANTHER PWWP DOMAIN PROTEIN 867 941 - -
Lal20g0002 1334 PANTHER PWWP DOMAIN PROTEIN 1 537 - -
Lal20g0002 1334 Gene3D - 802 944 IPR008942 -
Lal20g0002 1334 MobiDBLite consensus disorder prediction 1057 1071 - -
Lal20g0002 1334 Pfam PWWP domain 27 109 IPR000313 -
Lal20g0002 1334 ProSiteProfiles PWWP domain profile. 26 83 IPR000313 -
Lal20g0002 1334 SMART 558neu5 803 957 IPR006569 -
Lal20g0002 1334 CDD HDGF_related 22 108 IPR035496 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0002 Lal-Chr20 21110 29957 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0002 - - lang:109348483 2241.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0002 20 21110 29957 Lal13g0193 13 1200194 1212506 PCT
Lal13g0193 13 1200194 1212506 Lal20g0002 20 21110 29957 PCT