Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0193 ATGGCTCCTAGCCGCAGAAAGGGCTCTAGCAAAGCGGCCGCCGCCGCCGCTTGCTGCCAATGGAAAATCGGTGATCTTGTACTTGCCAAACTTAAAGGTTTCCCTGCGTGGCCGGCCACGGTAAGTGAGCCTGAGAAGTGGGGTTACAAAGCTGATCTGAAGAAAGTTCTTGTTCACTTCTTTGGAACCCAACAAATAGCTTTCTGCAATCCTGTTGATGTTGAAGCATTTACTGAGGAGAAAAAACAGTCTCTTGTTAAACGTCATGGAAAGGGTGCTGACTTTGTTCGTGCTGTGCGAGAGATTGTTGATAGTTATGAAAGATTGAAGAAAGAGAAAGAGACCCAGCACCATGAAGCTAGCTGTGGTGATGTTGCTGATGCAAATGTTTCAAATCCTGTTGAATCATTTGTTGAGGATCCAACAGATGCTCTTGAACTAGCACTAAGTTTACCGAAAAAAACTTCAGATTCTGTTTCAAACAGACAGGAGACGGAATGTGCAACAGAGAATGACTCAGCTCATAATAAAGAGGCATCATTGGAGGATCCTTGTAATAATGTTTCTGCTCTAAAATCACCTAAGCCTGTTGCTAATTCTTCCCGGAAAAGATCAACAGACAACTTGTGTTCACAAGGCTGTGTAACAAACAGAAATACACTAGTAAGAAGGTCTAGAAGCACATCACGGGTCCAAAACTTTGTGATGCCTTGTATTGATGGTGGGAAAGTTGTCAACAACCTATCAGGTAATGCAGCTCAGCGTGCATATGTTCGAAGGAATAAGTGTATCAGGAAATCACCTGATCTTTCTGGCTGTGTGGATTTTGGTTCACCTGCTTTTGTCTCAAATGGTAGCATGGTGGATAATGGTTCTGAAATTCTGACAATTGATTCTGATGCATTTAGCCTGAATGAGGGAAGCACTATAGATTCAAATTTTAAGCATGAAGACACCATTGGATGTCTAGAAGAAGTTGAACTGAACAAAGGGCTTGATGTCGAAATAAAATCCGTAGTCAACAAGAAGAAAAGAAAACCAAGTAGGAAGAGGGCAAGCCATGATGTTGCCAAGCCGGTCAATAAGCAAGAGGAGGAGACTCCTGTGCAGAATCCCGGTCCAAGTTCACAAAACATTTGTGGAAATTCAGAAGGGAACTTTGTTGAACATGGTGGAGATGAACACTTGCCCCTTTTGAAACGATTAAGAGTCAGAATGGGACAATCGTTATCCACTGAGGCAGAGGTCAATAACTTTGTACAAGCTCAAGAAAGAAGTTGTAATGAAAATATTAACTCACCAGCACATATCATTACATCCTCAAATTGTGAAAGTGGTAGCTCCATGGGTGATGAATCATCTTTGCTAAATGGAGCTTCAGGTAGTGTTTTTCCTTCCAAGAACTTAGCTCCACCTCTCGTCACTCAGATTCCTAATACTGAAAAAGACCAAACATTCATTTCAATGGATGATGAAGCTGCTTTGCCTCCATCTAAACGCCTCCATCGTGCTTTAGAAGCCATGTCAGCTAATGCCGCTGAAGAATTTCAATCGCATATGGAAGCAACACCCTGTATGATGACATCGAGTGATAAATGTTGTATATCCACTGTCAAGAAATGTCCATGTATGGCCATTGATAATCAAGAAGGTAATGGATTAGAACCACAAGGGTTGGATAATTGTGCCACTGATCCTTCTTCCATTAACGTGTGTAGTTTCTCAACCAGTTCAAATCCAATGATTTCCGTAGACAATAGATCATTTATTCAAGTGGATAAGCAGTTGACTATGTTCCAGGAACACAATATTGGCAACGATGTTCTTTCAGGTGTTACAGATCAAGTTGGAGAAGATCATAGTGATAATGCGATTTGTGTGACTGCTAAGACAGATTTGAAAATTCAGTTACATGGACACATTTCTCCCAGTCTTGGTTTGAATTGTTGTGAAGGTGGAAGCAATCAAAATTCACCAGATCCATCATTGCTGCCAAATAATGAAGACAATACCAGAGCTCATAATCATTCAAACACAGCATTTAATGCATCAGAACATAATGGAATAAGTCTTGATCCTGTGGTTGCCAGAGTAAATAATGATGCTTTAGTTCCAAATAATATTGACGCACCCCCGAAAAAGGTCGTTGTTTGTGAGGATACTGAGTTCTTGAATCTAGCAGCTGTTGATAGTGGGAAATCAAATGACATGAGTGTGGTTGTGAAAGAGATAAAATCTGAAGGACCAGAAGGGGATATGAATTCTGTTTCAACATCTGATGACTTGGGCGAAAAGGCTATTTTGGGCACTCGGTCTAGTCCATCCTTGACTGATGGGGGAGATTGCATTCCACATGGATCACCTCCAAATACGTCAGTTTGCAATGTTTCTACATCAGATAGTAGTAATATCCTTCATAATGGAAGTTGTAGCCCTGATGTATACCCGAAGCAAACGCTATCTGGTCCTGGTCCCATTGATGGAAGCAAAGATGGGTTTGTGGCAACTCAACAATCTAGATCGCTGGGCAAGACAACTGATGCAGGTCGTGCTGCTTTGTTGTACTTTGAAGCAATGCTTGGGACATTAACAAGGACAAAGGAAAGTATTGGTCGTGCAACACGCATAGCTATTGACTGTGCAAAGTTTGGTATTGCAGCTAAGGTCATGGAAATTCTTGCTCAAAATCTGGAAACAGAGTCAAGCCTGAATCGGAGGGTGGGCTTGTTTTTTCTTGTTGACTCTATTGCACAGTCTTCTCGAGGTTTAAAAGGCGATGTTTGTGGAGTATATCCATCTGCAATCCAAGCAGTTTTGCCACGACTATTGTCTGCTGCTGCTCCACCAGGAAATACTGCACCTGAAAACCGCAGGCAATGCCTCAAGGCAAGTTTATGGAGTTTCATGTTTATTGAAGTTTTAAGAGTGTGGTTGGAAAGGAGAATCCTACCGGAGTCCATTGTTCGCCGTCATATACGGGAACTTGACTCATATAGCAAGTTAGCTTCTGCATGTGTTCACTCGCGACGGACATCAAGAACAGAGAGACCTTTAGATGACCCTATTAGAGAAATGGAGGGTATGCTTGTTGATGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGATTTTGTATGCCCCGAATGCGAAAAGATGAAGATGAAGGGAGTGATTCTGATGGAGGAAACTTTGAGGCTGTTACGCCTGAGCATTATTCTGAAGTATGTGATGTGTCTTCTACAAAAGAAAAACACAGACATATTCTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCTTCGTGTGATGTTGAGATGAACTCAATTCAGAATGTTAATGGTGGAAATGCTTCACAGTTTCTGGAGAGTCTTCCCCTGTCCTTTGCTCCTCTACCACAGGATGTGCAACCTTCACCACCACCAGCACCATCATCTTCTCCAATGCCTCCTCCTCCTCCTCCACCCCCACCTCCTATGCCGCACCTCATGACATCTGCCTCAGATCCATATCACACTGTAATGAATTCAAAAGGTTATACAGATTCACAGACTGTGAAGGACAAACCTCTCCACTCTGTGGCTCAGCCATTGACTGCACCAAGCAGAAGTCAACCTATCAGTGATGCAGTACACTATCAAGTCCCGGAATGTAGAGAAATGCAATTGCACATGCCAGAATCTAATAGCTCTTTCAACAGTTTCCCTGTGCTACCAGACAATTTTCGCCATTCGGACGGGGTTACCAGGCATAATAATAAAGGGTACTCTTTAAGGCCACCTCACCGTGTTCCGTCCAATCAGTTTTCTTTTGTTCACAGGGAACAACATGTGAAGCATCGAAGGGAGGTTCAACCTCCCCCACCCCCACCCCCACCCCCTCTGTACTCCAATAGACACCACTTGGTGCAGAACATGGAGAGAGAGTACTTCTACAATAATCATGAGAGATCAAAACCACCTCCATATGATCACCGAGAGCGATGGAATACTCCTGCTCCTTATTCTGATCATCGGTATCGGGACAGAGGTTTGCCTGCCCCATATGGTTGTCATCCATGTGAATCAACAAGATTACCAAGACATGGATGGAGATTTCCTCCCCAGTCAATGGATCACAGGAACTCCATGCCACTTAGACCACCACCCTTTGATGATGCAATTCCAGTGGCTAACAGATGTCCAAACTTTTGGGGGCCTACCTGA 4212 0.4311 MAPSRRKGSSKAAAAAACCQWKIGDLVLAKLKGFPAWPATVSEPEKWGYKADLKKVLVHFFGTQQIAFCNPVDVEAFTEEKKQSLVKRHGKGADFVRAVREIVDSYERLKKEKETQHHEASCGDVADANVSNPVESFVEDPTDALELALSLPKKTSDSVSNRQETECATENDSAHNKEASLEDPCNNVSALKSPKPVANSSRKRSTDNLCSQGCVTNRNTLVRRSRSTSRVQNFVMPCIDGGKVVNNLSGNAAQRAYVRRNKCIRKSPDLSGCVDFGSPAFVSNGSMVDNGSEILTIDSDAFSLNEGSTIDSNFKHEDTIGCLEEVELNKGLDVEIKSVVNKKKRKPSRKRASHDVAKPVNKQEEETPVQNPGPSSQNICGNSEGNFVEHGGDEHLPLLKRLRVRMGQSLSTEAEVNNFVQAQERSCNENINSPAHIITSSNCESGSSMGDESSLLNGASGSVFPSKNLAPPLVTQIPNTEKDQTFISMDDEAALPPSKRLHRALEAMSANAAEEFQSHMEATPCMMTSSDKCCISTVKKCPCMAIDNQEGNGLEPQGLDNCATDPSSINVCSFSTSSNPMISVDNRSFIQVDKQLTMFQEHNIGNDVLSGVTDQVGEDHSDNAICVTAKTDLKIQLHGHISPSLGLNCCEGGSNQNSPDPSLLPNNEDNTRAHNHSNTAFNASEHNGISLDPVVARVNNDALVPNNIDAPPKKVVVCEDTEFLNLAAVDSGKSNDMSVVVKEIKSEGPEGDMNSVSTSDDLGEKAILGTRSSPSLTDGGDCIPHGSPPNTSVCNVSTSDSSNILHNGSCSPDVYPKQTLSGPGPIDGSKDGFVATQQSRSLGKTTDAGRAALLYFEAMLGTLTRTKESIGRATRIAIDCAKFGIAAKVMEILAQNLETESSLNRRVGLFFLVDSIAQSSRGLKGDVCGVYPSAIQAVLPRLLSAAAPPGNTAPENRRQCLKASLWSFMFIEVLRVWLERRILPESIVRRHIRELDSYSKLASACVHSRRTSRTERPLDDPIREMEGMLVDEYGSNSSFQLPGFCMPRMRKDEDEGSDSDGGNFEAVTPEHYSEVCDVSSTKEKHRHILEDVDGELEMEDVAPSCDVEMNSIQNVNGGNASQFLESLPLSFAPLPQDVQPSPPPAPSSSPMPPPPPPPPPPMPHLMTSASDPYHTVMNSKGYTDSQTVKDKPLHSVAQPLTAPSRSQPISDAVHYQVPECREMQLHMPESNSSFNSFPVLPDNFRHSDGVTRHNNKGYSLRPPHRVPSNQFSFVHREQHVKHRREVQPPPPPPPPPLYSNRHHLVQNMEREYFYNNHERSKPPPYDHRERWNTPAPYSDHRYRDRGLPAPYGCHPCESTRLPRHGWRFPPQSMDHRNSMPLRPPPFDDAIPVANRCPNFWGPT 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0193 1403 MobiDBLite consensus disorder prediction 364 384 - -
Lal13g0193 1403 MobiDBLite consensus disorder prediction 153 167 - -
Lal13g0193 1403 Gene3D - 3 106 - -
Lal13g0193 1403 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1402 - -
Lal13g0193 1403 Coils Coil 96 116 - -
Lal13g0193 1403 MobiDBLite consensus disorder prediction 1132 1187 - -
Lal13g0193 1403 SUPERFAMILY Tudor/PWWP/MBT 18 117 - -
Lal13g0193 1403 MobiDBLite consensus disorder prediction 652 685 - -
Lal13g0193 1403 MobiDBLite consensus disorder prediction 180 209 - -
Lal13g0193 1403 Gene3D - 854 1004 IPR008942 -
Lal13g0193 1403 Pfam CID domain 856 988 IPR006569 -
Lal13g0193 1403 MobiDBLite consensus disorder prediction 151 209 - -
Lal13g0193 1403 PANTHER PWWP DOMAIN PROTEIN 1 1402 - -
Lal13g0193 1403 SMART 558neu5 855 996 IPR006569 -
Lal13g0193 1403 ProSiteProfiles CID domain profile. 848 999 IPR006569 -
Lal13g0193 1403 CDD HDGF_related 20 103 IPR035496 -
Lal13g0193 1403 ProSiteProfiles PWWP domain profile. 23 80 IPR000313 -
Lal13g0193 1403 MobiDBLite consensus disorder prediction 1171 1187 - -
Lal13g0193 1403 MobiDBLite consensus disorder prediction 1278 1298 - -
Lal13g0193 1403 SMART PWWP_4 21 78 IPR000313 -
Lal13g0193 1403 MobiDBLite consensus disorder prediction 1135 1166 - -
Lal13g0193 1403 MobiDBLite consensus disorder prediction 341 392 - -
Lal13g0193 1403 Pfam PWWP domain 24 106 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0193 Lal-Chr13 1200194 1212506 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0193 - - lang:109335388 2365.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0193 13 1200194 1212506 Lal13g0193 13 1200194 1212506 ECH
Lal20g0002 20 21110 29957 Lal13g0193 13 1200194 1212506 PCT
Lal13g0193 13 1200194 1212506 Lal20g0002 20 21110 29957 PCT