Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2299 ATGTCAAATTCAAAGGAGAAACAGCATAGTGTGAGTTTGATGAGAATGGAGTCTGATACTTCTTCACCCTTTCTTTCAGTTAAAGAAGCTGCTACCCATTACATGAACTTCATTACATCTTCGGTCTACAAAGAAGAGTGTGATCCCGAAAAATTGGAGGAGCAGGCTGCAATATTGAAGAAAGAACTGATCCTGAAAGAAAGGGAAACTCTTGATGTGTTAAAAGAAGTCGATAGTACGAAAAGGCTTGTCGAAGATTTGAAATCAAAACTAAAGGAGGAAGAATCGAAGGCGAAAAGTGTATACAGTCCTGAAGAGAACGAAAACCAGACGACTCGGTTGAATGTTGTTCAACCTTTGCGGGGTGATTTCATTTTTTATCCTTCATATAATGCAGGCAAAGTAATAATGGAACTTAAGCAGGCGAAAATGAATCTGATCAAAATTTCCTATGATTTTGCTGGTAGAAGAGCTTTTGTCAGATCACTTAACAAGAAGTTAAAGAATGACCGGATCGCGCTTGAGAAAACTCGTGAGAGGTTAGCTCTAAATTGTTGGAAAATATCTTCTCTAGAGGAAGAGCTAAACCAGATAAGACTAAGATTGCATGTAGCAAAAGGTTCTGAAATCAAATATGCTTTAGATGATCCTTTAGATGTCAAAAGAGAGATCCAGAGAATGATTTCTAAGTCAGAGCATTTTAGAAAAGTTGGAGAAGCTGCAAAATCAGAACACTTTAGAACAATGTCGGAGATCGAGGAAACAAAAATGTCGATAAGAACTTCTGAATTGTGGTTGGATGCTGCCAGAAAAATGAAGGAAGCTTCAAATGCAGCAGAAGCTGTTGCTCTATCAGAAATTGATGCTTTATCTAATCAAAACCATGAAGTGATCACTCTTTCTATTGAAGAATATACTGCTCTGACCCGAAAAGCTCGAGATGCTGAAGAACAATCTAAGAAGAGAGTTATAGATGCTATGCTTGAAATCGATCAAGCAATGCTTTCAAAAATACAGATTTCAAAAAGGGTGGAGGAAGCTACCAAAGATGTTAAAACCAACAAAAAGGCTCTTGAAGAAGCTCTTGAAAGGGTAGAGGCTGCAAATAGAGAGAAGGTAGCAGTTGAAGAGGCTTTAAGGAGGAGGAAATTCGATGGCCACAAAAGGCGTCTGTCTAGACATAATCCTGCCAAGTTCAAGAATTCATCTTCGGGTCGGAGAGATTCGCAATTACTCGATGTAAATGGAATGAATTTGGTAAATGAAGAAACCAAGGTGGTTTCAAAGTCATCCCAATCAATAAGACAAATACTAAGCAGAGAGTTACTTGCAACACAAGAAACTGAAGTTGGCATGCCCAAGGAAAGAAATTCAGTGCAATTGGGTCAGATTATTTGCACACAAGATAATGATCCATCCTTTGACATAAAACTTGATGAAGAAAATTACAAGCAGAAATTTTCTTCAAAGAGAAAGAATTTTGGATTGGTTAAAGCTGCACTTTTTTTGGTAAAAAAACTGAAGAAGAAGAATCAACCAATACTGAGGAGACAACCAACACTGAAATCTTGGCTTCAATAG 1581 0.3763 MSNSKEKQHSVSLMRMESDTSSPFLSVKEAATHYMNFITSSVYKEECDPEKLEEQAAILKKELILKERETLDVLKEVDSTKRLVEDLKSKLKEEESKAKSVYSPEENENQTTRLNVVQPLRGDFIFYPSYNAGKVIMELKQAKMNLIKISYDFAGRRAFVRSLNKKLKNDRIALEKTRERLALNCWKISSLEEELNQIRLRLHVAKGSEIKYALDDPLDVKREIQRMISKSEHFRKVGEAAKSEHFRTMSEIEETKMSIRTSELWLDAARKMKEASNAAEAVALSEIDALSNQNHEVITLSIEEYTALTRKARDAEEQSKKRVIDAMLEIDQAMLSKIQISKRVEEATKDVKTNKKALEEALERVEAANREKVAVEEALRRRKFDGHKRRLSRHNPAKFKNSSSGRRDSQLLDVNGMNLVNEETKVVSKSSQSIRQILSRELLATQETEVGMPKERNSVQLGQIICTQDNDPSFDIKLDEENYKQKFSSKRKNFGLVKAALFLVKKLKKKNQPILRRQPTLKSWLQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2299 526 Coils Coil 160 184 - -
Lal1g2299 526 Coils Coil 77 97 - -
Lal1g2299 526 Pfam Weak chloroplast movement under blue light 137 388 IPR008545 -
Lal1g2299 526 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 6 512 - -
Lal1g2299 526 Coils Coil 188 208 - -
Lal1g2299 526 MobiDBLite consensus disorder prediction 386 408 - -
Lal1g2299 526 PANTHER MYOSIN HEAVY CHAIN-LIKE 6 512 - -
Lal1g2299 526 Coils Coil 341 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2299 Lal-Chr1 24908138 24910896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2299 - - gmx:100785049 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2299 1 24908138 24910896 Lal1g2299 1 24908138 24910896 ECH
Lal9g1713 9 19375435 19377863 Lal1g2299 1 24908138 24910896 LSH
Lal1g2299 1 24908138 24910896 Lal14g0788 14 9818521 9821624 PCT
Lal1g2299 1 24908138 24910896 Lal19g0305 19 3191091 3194289 PCT
Lal14g0788 14 9818521 9821624 Lal1g2299 1 24908138 24910896 PCT
Lal19g0305 19 3191091 3194289 Lal1g2299 1 24908138 24910896 PCT