Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0305 ATGTCAATGACTAAACCAGGTTCCGACCAAGGTGGTGGTGGTGGTGGTGACGGCGTAGCGAAGAACGAGAAAGATGAACGTAATCGTTGTGTCGAGATTGATACATCGGCGCCGTTTGAATCGGTGAAAGAAGCCGTCACACGATTCGGCGGTGTTGGTTATTGGAAACCCATTCCCAACAATAACAACAACAATAATAACAACAATAATAATAACAAGTTCGTGTTTTCTGAGCTGCCCCAGACGGAAGAGCTTGACGCCAGAAAACTGGAGGAGCAAGCAACAGTGCTTGAGAAAGAACTGATCCTGAAAGAAAGGGAAACTCTCGATGTCTTAAAAGAGTTAGAAAGTACTAAAAGGCTTGTGGAAGATTTGAAATCAAAGGTGCAGAAGGAAGAAGCACAAGTGAATTTGAATCTTGAGATGAATGTATGTGATAATATATCTTCTGTGGAGGAAAAAGAAGATAAGGAAAACCAAGTATGTCATGTTCTTCAGCATTCAACGGAAGGTTGTAGCCGATACCCTTCACCAACTCCAGGGTTAATACTAATGGAACTGAAGCAGGCAAAATTTAATCTGAACAGAACTACAAATGATATATCGGATGTCCGAGTTTCTGTTGAATCACTTAATAAGAAGTTAGAAAAGGAAAGGATCTCACTTGAGAAAACCCGAGAGAGGTTAACCCAGAATTCTTCAAAAATATCTTCTCTCGAGGAAGAGTTAAACCAGACTAGACTAAAACTGCAAGTGGCGAAAGATGCTGAAATTAAAGGTGGTTTTGACGATCCTTCAGATATTACAAGAGAGCTCCAGAGGTTGAGTTCCGAGGCAGATCATTTCAAAAAAATGGGAGAAGTTGCGAAATCAGAAATGTCGAGAGCAGTGTCTGAGATTGAACAGACAAAAGCTATGATAAGCACTGCTGAAATCAGGTTGGTTGCTGCAAGAAAAATGAAGGAAGCTGCTAGAGCAGCAGAAGCTTCCGCCCTTGCAGAAATCAAAGCTTTATCTCATCACGAGAGTTCAACCGGAGATTGCATGCAAAAGCATGAAGCAGTCACTCTTTCCTTCGAAGAGTATACTGCCCTGACAAGCAAAGCTCGAGCTGCCGAGGAACTTTCTAAGAAGAGAGCTTTAAATGCTATGTATCAAGTTGATGAAGCAAATTTATCCAAAATGGACATCTTGAAAAAGGTAGAGGAAGCAACAGAAGAAGTTATAACCAGCAAGATGGTCCTGGAAGAAGCTCTGGAAAGGGTGGAGGCTGCAAATAGAGGAAAGCTAGCGGTTGAAGAAGCTTTAAGAAAGTGGCGCTCTGACGGATACAAAAGGCGTTCTTCTATACATAATGCTATCAAGTTTAAAAATTATTCTTATCAATCTCAGCATCGGAGAGATTCTCAGTTATTTGATGTGAATGGGCTGAACCTGGCAAACGATGAAGCCAAGCCAGTTCTCAAGTCGACCTTATCAATAGGGCAAATATTGAGCAGGAAGCTGATGCTGCCAGAAGAGTTTGAAGGCAAGACACATAGGGAAAGAAGCTCGGTGAAACGGAAGGTGTCATTGCGGCAGATGCTCGGCAAACAAAATGATGATCCATATCCATCCTTTGACAGGCAAGTTGAGAAAGAGAATAGTCAGAAGCAGTTTTCTGCAAAGAGGAAGAAATTCGGATTTGCTCGGTTTTCCCTTCTTCTGACTAAACAACAAAAGAAGAAGAAGCCAACACTGAACTTGAGATGA 1752 0.4184 MSMTKPGSDQGGGGGGDGVAKNEKDERNRCVEIDTSAPFESVKEAVTRFGGVGYWKPIPNNNNNNNNNNNNNKFVFSELPQTEELDARKLEEQATVLEKELILKERETLDVLKELESTKRLVEDLKSKVQKEEAQVNLNLEMNVCDNISSVEEKEDKENQVCHVLQHSTEGCSRYPSPTPGLILMELKQAKFNLNRTTNDISDVRVSVESLNKKLEKERISLEKTRERLTQNSSKISSLEEELNQTRLKLQVAKDAEIKGGFDDPSDITRELQRLSSEADHFKKMGEVAKSEMSRAVSEIEQTKAMISTAEIRLVAARKMKEAARAAEASALAEIKALSHHESSTGDCMQKHEAVTLSFEEYTALTSKARAAEELSKKRALNAMYQVDEANLSKMDILKKVEEATEEVITSKMVLEEALERVEAANRGKLAVEEALRKWRSDGYKRRSSIHNAIKFKNYSYQSQHRRDSQLFDVNGLNLANDEAKPVLKSTLSIGQILSRKLMLPEEFEGKTHRERSSVKRKVSLRQMLGKQNDDPYPSFDRQVEKENSQKQFSAKRKKFGFARFSLLLTKQQKKKKPTLNLR 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0305 583 Pfam Weak chloroplast movement under blue light 181 445 IPR008545 -
Lal19g0305 583 Pfam Weak chloroplast movement under blue light 32 141 IPR008545 -
Lal19g0305 583 Coils Coil 87 107 - -
Lal19g0305 583 Coils Coil 387 407 - -
Lal19g0305 583 Coils Coil 415 435 - -
Lal19g0305 583 MobiDBLite consensus disorder prediction 509 555 - -
Lal19g0305 583 MobiDBLite consensus disorder prediction 538 554 - -
Lal19g0305 583 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 28 577 - -
Lal19g0305 583 MobiDBLite consensus disorder prediction 1 32 - -
Lal19g0305 583 PANTHER MYOSIN HEAVY CHAIN-LIKE 28 577 - -
Lal19g0305 583 Coils Coil 205 256 - -
Lal19g0305 583 Coils Coil 112 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0305 Lal-Chr19 3191091 3194289 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0305 - - gmx:100783770 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0788 14 9818521 9821624 Lal19g0305 19 3191091 3194289 LSH
Lal9g1713 9 19375435 19377863 Lal19g0305 19 3191091 3194289 PCT
Lal1g2299 1 24908138 24910896 Lal19g0305 19 3191091 3194289 PCT
Lal19g0305 19 3191091 3194289 Lal9g1713 9 19375435 19377863 PCT
Lal19g0305 19 3191091 3194289 Lal1g2299 1 24908138 24910896 PCT