Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1911 ATGAAGATTCAGCCAATAGATTCTAAGGAGGAGGAGGAGATGAGTGTGGTGGAGGTGGTGAAGCCGGTTGCTAAGTCCAGGATAAAGCGTCTCTTTGATAGACAGTTTTCCGTTCTTAAGTATTCAGCCGCCGCCGATAAGATCACCGCCGCCGCCGCTGGAGATGGCTTTGATAAAGGATCCGATGATGTTGAACCGAGCTCGGTGTGTTTGCGGAAAATGGTGCAGAATTTCATGGAAGGAGGGAATTATGATAAATACTCTGTTTCTAGTAACTGCTTCAATGCCAACTGTGACTTTGGTTCCGACACTGAATCTGAAACTTATTCTTCTTCCGCTGAACCATCTGAAATACTCAAGGGTTTGGTGGTATGTGCGAGTGTTTGTGAGAGGAATTTGCTTGCGGATACTGCAAAGATAGTTGAGAAGAACAAGATGGTGTGCAAGAGAAAAGATCAAGTTTGCAGAAACATTGTGACTCAAGGTTTAATTGCATTTGGATATGATGCTTCTGTCTGCAAATCTCGCTGGGAAAAATCCCCTTATTATCCTGCTGGGGAATATGAATACATTGATGTGATGATCGAGAAAGAGAGGGTACTAATTGACATTGACTTCAGATCAGAATTTGAGATTGCTAGATCAACCAAGGCATACAAGGCCATCCTCCAAGGTCTCCCCTACATATTTGTTGGCAAGTGTGATAGGTTGCAGAGCATTATAGCCGTTGCATCAGAGGCAGCAAAGCAGAGTTTGAAGAAAAAAGGCATGCCTGTTCCTCCATGGAGAAAACTTGGATATGTCAAAGCAAAATGGCTCTCCACTTATATAAGAACCACAATTACACCGGCCCTCCTTGATACACAAACAAACAAAGAGGAAACCAAAAAGCAACATCAGTTGAACAAATCAGTGTTAACTTCCGGTGTAGAGGATAAGCCGAAGATGGTGGTGGTTCATTGGAAGTTGCCGGAGGCTAAGCCGAAGAGCATACAGTCTGGTTTGGCAGCTTTCTTTGCTGAAAAAACAGAGAAGTTTTGA 1041 0.4352 MKIQPIDSKEEEEMSVVEVVKPVAKSRIKRLFDRQFSVLKYSAAADKITAAAAGDGFDKGSDDVEPSSVCLRKMVQNFMEGGNYDKYSVSSNCFNANCDFGSDTESETYSSSAEPSEILKGLVVCASVCERNLLADTAKIVEKNKMVCKRKDQVCRNIVTQGLIAFGYDASVCKSRWEKSPYYPAGEYEYIDVMIEKERVLIDIDFRSEFEIARSTKAYKAILQGLPYIFVGKCDRLQSIIAVASEAAKQSLKKKGMPVPPWRKLGYVKAKWLSTYIRTTITPALLDTQTNKEETKKQHQLNKSVLTSGVEDKPKMVVVHWKLPEAKPKSIQSGLAAFFAEKTEKF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1911 346 PANTHER OS03G0796600 PROTEIN 22 336 IPR006502 -
Lal1g1911 346 Pfam PDDEXK-like family of unknown function 73 278 IPR006502 -
Lal1g1911 346 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 22 336 - -
Lal1g1911 346 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 157 279 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1911 Lal-Chr1 21333005 21337007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1911 - - gmx:100781835 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1911 1 21333005 21337007 Lal12g0185 12 1300513 1302596 PCT
Lal12g0185 12 1300513 1302596 Lal1g1911 1 21333005 21337007 PCT