Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0185 ATGCCTTTTCCGATGAAAATTCAGCCGATCGATTTTCAGTTACCGGCGGAAGGAAATAAGCTTGAGCTGGCCAAACCTGTCGTCAAGTCACGTCTGAAGCGGCTCATTGAGCGCCAGTTCTCCGGCGTACTGAGAAATCCTGCGGTGGAGAAAATCGCCGGCGAGGAACAGAATTTGTGCAAGGACGGCATCAACAACTGCTCACATGATTTTGAGCCGAGTACGGTGTGCTTGACGAACATGGTGCATAATTTCATAGAGGAGAATCCCGAGAAGCACTCTGTTTCCGTTAGGTGCGGACGTAACCGCTGTAACTTCTTCAATAGGAACTGTGACGATAACTCTGAAGACGACTCAAACGATTTCAGCGAGTCTAACTATTCTCCCAGTGAAGCGTGTGAAATCCTCAAGGGTATGGTAGCTTGTGCAAGTGTTTTTGAGAGGAACTTGCTAGCGGACACTGCAAAGATAGTTGATAATAATAACAAAATCTGCAAGCGCAAAGACAGTAACTGCAGAAAGATTGTTACCGAAAGTTTGTTAACTCTCGGATATGATGCCTCCATTTGCATATCTCGTTGGGAAAAATCCCCTTCCTGCCCCGCCGGGGAATATGAATATATAGATGTGATATTAGGGAAAGAGCGGGTGTTAATTGACATTGATTTTAAATCTGAATTCGAGATCGCTAGATCAACGAAGACGTATAAGACGATTCTCCAGAATCTTCCATACATATTTGTAGGCAAGTGTGATAGGTTGCAGAGCATTGTGGCTTTGGTATCTGAGGCAGTGAAGCAGAGTTTGAAGAAGAAAGGGATGCATGTTCCACCGTGGAGGAGGGCTGAATACGTTAGAGCAAAGTGGCTTTCTCCTTATACGCGCGCTACGCCACCAAAGATGGAGAATCTGAAGCTATTGAAGGGAAGTAACTGTGTTGAGTCTCAAGTTTGTGAGAGTTCAGGTGAAGAGAAGGCGGAGGTGAGGGCGGTGGTAGAATGGAAACCATCGGAGCTCAGGCCCAAGGGTTCACTCTCTGGAGTTAAGGTTGTAACTGGTTTTGCAGCAGTTTTTCATAATGATAATGAATAA 1092 0.4551 MPFPMKIQPIDFQLPAEGNKLELAKPVVKSRLKRLIERQFSGVLRNPAVEKIAGEEQNLCKDGINNCSHDFEPSTVCLTNMVHNFIEENPEKHSVSVRCGRNRCNFFNRNCDDNSEDDSNDFSESNYSPSEACEILKGMVACASVFERNLLADTAKIVDNNNKICKRKDSNCRKIVTESLLTLGYDASICISRWEKSPSCPAGEYEYIDVILGKERVLIDIDFKSEFEIARSTKTYKTILQNLPYIFVGKCDRLQSIVALVSEAVKQSLKKKGMHVPPWRRAEYVRAKWLSPYTRATPPKMENLKLLKGSNCVESQVCESSGEEKAEVRAVVEWKPSELRPKGSLSGVKVVTGFAAVFHNDNE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0185 363 PANTHER OS03G0796600 PROTEIN 24 362 IPR006502 -
Lal12g0185 363 Pfam PDDEXK-like family of unknown function 80 295 IPR006502 -
Lal12g0185 363 PANTHER DUF506 FAMILY PROTEIN 24 362 - -
Lal12g0185 363 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 173 296 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0185 Lal-Chr12 1300513 1302596 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0185 - - gmx:100782749 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1911 1 21333005 21337007 Lal12g0185 12 1300513 1302596 PCT
Lal12g0185 12 1300513 1302596 Lal1g1911 1 21333005 21337007 PCT