Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1874 ATGGGTACTCTAACAAACCGTTACACCTTCCTCTCTCTTCTTCGCTTCTTCACACTTTCCATTCCCTTTCTTCTTCTTCCAACACTTTCAGACACAACCACCTTCATATACAAAGGTTGTGCAAATCAGAAGGTTCTAGACCCTTCTCGAACTTTCTCTCACTCTCTCAATTCCCTCTTCTCTTCCCTTCTTTCACAAGCTTCGCTCAAGAACTTCGCCGCCACTACTTCCGGCGACGGCGCCTCCGTCACTGGGTTGTACCAATGCAGGGGTGACCTCAGTAACTCTGATTGCTATAATTGTGTCAGAAAGATCACTGACATGGTCGGAAAATTATGTGATGCTGACGTGGCTGCCGTCAGGGTCCAGCTCAGCGGTTGCTATCTGAGGTATGAGATGGTTGGGTTCAAGCAGGTTCCACAGACACAGCTTCTGTACAAGGTTTGTGGGTCAAAGAAGGTGAATGATGGTGTTGGATTTGAGGAAAAGAGGGACTCAGCTTTTGGTATGGTGGAGAATGGTGTGAAGAGTGGTGGCAACATGTTCTACACTGGGAGTTATAAGTCTCTTTATGTGTTGGGACAATGTGAAGGTGACTTAGGAAATGATGATTGTGGTGATTGTGTTAGTAGTGCTGAGCAACAAGCTAAAGCTTTGTGTGGTGATTCAATTTCTGCACAAGTTTATCTTCATGGTTGTTATATCAGTTATAGTTTTTACCCCAGTGGAGTTCCTACCACTTCATCTTCACCAGGATCTGGATCAGAATCTGGTGGAGGGCATCAACATACAAATAGAACTGTAGCTCTTGCAGTGGGAGGTTTTGCATCTCTTGGATTGTTGATTGTTTTTTTGTTATTTCTCAAATCAGCTTTGAAGAAAAAAGGTGGCAAACATTGA 900 0.4411 MGTLTNRYTFLSLLRFFTLSIPFLLLPTLSDTTTFIYKGCANQKVLDPSRTFSHSLNSLFSSLLSQASLKNFAATTSGDGASVTGLYQCRGDLSNSDCYNCVRKITDMVGKLCDADVAAVRVQLSGCYLRYEMVGFKQVPQTQLLYKVCGSKKVNDGVGFEEKRDSAFGMVENGVKSGGNMFYTGSYKSLYVLGQCEGDLGNDDCGDCVSSAEQQAKALCGDSISAQVYLHGCYISYSFYPSGVPTTSSSPGSGSESGGGHQHTNRTVALAVGGFASLGLLIVFLLFLKSALKKKGGKH 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1874 299 Gene3D - 31 136 IPR038408 -
Lal1g1874 299 Gene3D - 141 241 IPR038408 -
Lal1g1874 299 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 9 296 - -
Lal1g1874 299 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 9 296 - -
Lal1g1874 299 Pfam Salt stress response/antifungal 155 239 IPR002902 -
Lal1g1874 299 Pfam Salt stress response/antifungal 40 132 IPR002902 -
Lal1g1874 299 ProSiteProfiles Gnk2-homologous domain profile. 33 136 IPR002902 -
Lal1g1874 299 ProSiteProfiles Gnk2-homologous domain profile. 142 242 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1874 Lal-Chr1 21034771 21038107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1874 23 272 Receptor kinase-like Gene Family AT4G05200 25.000 5.79e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1874 - - adu:107491720 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1874 1 21034771 21038107 Lal1g1874 1 21034771 21038107 ECH
Lal1g1874 1 21034771 21038107 Lal13g1053 13 7795553 7796782 PCT
Lal13g1053 13 7795553 7796782 Lal1g1874 1 21034771 21038107 PCT