Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1053 ATGGGTATGAACATGATCACAAAACGTTACTCCAAACCCTTTCCTTTTATCTTCATTGTATATGTGTTCTTTCTCCATCCTATATCAAATGCAGACAACACAAACTTGATTTTCAAGGGTTGTGCAGAACAGAAACTGCATGATCCATTTGGCATATGCACCAAAAACCTCAAATCCCTCTTGGTTTCTCTGGTGACACAATCTAGACAAAAGCCTTTCTACACAACAACCTCAGGGGAAAACAAAAACATGATCATGGGCCTGTACCAATGCAAAGGAGACCTCTCAAATATTTCCTGCTACAACTGCATTAGCAAGATTGATAACATGTTAGACACGCTTTGTGGCAAGGTGGTGGCTGCAAGGGTCCACCTTTGTGGTTGTTACCTGAGGTACGAGGTTGTTGGGTTCAAGCAGGTACCCGAGACTCACTTGCTTTACAAGGTTTGTGGATCCAAGCAAGAGAGTAGTGAAGATAATGATGATGGGTTTGTGGAGAAAAGGGAAATGGCATTTGATATGATTGAAAGTGGTGTGAAGAATGGTGAGAAGTTGTTTTACACTGGGAGTTATAAGTCTCTTAATGTGTTAGGGCAATGTGAGGGTGACTTGGCTAGTGATGATTGTGGGGATTGTATGAAGAGTGCTGAGGATCAAGCCAAAACTGAGTGTGGTGACTCACTTTCTGCACAGATTTATCTGAACAAGTGCTATATCAGTTACAATTTTAAACCAAATGAAATGCCCAAAAAATCATCTTCTCCAGGAACAGTGTTGCAACAACACACTCAGAAGACAATAGCTCTTGTAGTGGGAGGGTTTGCAGCTTTGGGTTTCTTTGCAGTTTTTGTGTTATTTCTGAAGTCAGTTTTGAAGAAAAAAGATGATATGTAG 894 0.4072 MGMNMITKRYSKPFPFIFIVYVFFLHPISNADNTNLIFKGCAEQKLHDPFGICTKNLKSLLVSLVTQSRQKPFYTTTSGENKNMIMGLYQCKGDLSNISCYNCISKIDNMLDTLCGKVVAARVHLCGCYLRYEVVGFKQVPETHLLYKVCGSKQESSEDNDDGFVEKREMAFDMIESGVKNGEKLFYTGSYKSLNVLGQCEGDLASDDCGDCMKSAEDQAKTECGDSLSAQIYLNKCYISYNFKPNEMPKKSSSPGTVLQQHTQKTIALVVGGFAALGFFAVFVLFLKSVLKKKDDM 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1053 297 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 16 295 - -
Lal13g1053 297 Pfam Salt stress response/antifungal 54 133 IPR002902 -
Lal13g1053 297 Pfam Salt stress response/antifungal 159 242 IPR002902 -
Lal13g1053 297 Gene3D - 32 137 IPR038408 -
Lal13g1053 297 Gene3D - 142 245 IPR038408 -
Lal13g1053 297 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 16 295 - -
Lal13g1053 297 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Lal13g1053 297 ProSitePatterns Heavy-metal-associated domain. 95 125 IPR017969 GO:0046872
Lal13g1053 297 ProSiteProfiles Gnk2-homologous domain profile. 145 246 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1053 Lal-Chr13 7795553 7796782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1053 3 295 Receptor kinase-like Gene Family AT5G40380 23.948 5.44e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1053 - - gmx:100795002 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1874 1 21034771 21038107 Lal13g1053 13 7795553 7796782 PCT
Lal13g1053 13 7795553 7796782 Lal1g1874 1 21034771 21038107 PCT