Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1873 ATGGGAGATAGTGAAACGGTAGTTGCTGAAGCATCTGCAGCTGAGGTGTATGCTTCAGCTGGACATGCTGACACAGCCATGAACCCAGTTCTGGAGGCAGGTCAGACCATTACTGATTCTGCCGGAGAAGGTGCTGAGGGAAATTCAACATATGGGTTTGGTTATTCTAATGCTGGTGATGGGACATATGCTGGGGATCCTAATTCTGTTCTGCAAGCACAATTCAGTGCAACAGATGATAATAAACAAGCTGTTGGTATGATTGGTACTGATGAAGCCTCTGGTAGGCTCGGAAACGCAGCTACAGAGCCTGTTCAAGTTTCTGAGTATAATTCAGCTGTAAATGGCAGTGTTGTTGGTGCAATGGGAAATGCTACAGGACATGAAAATGGGAATGCGGTGGAGAATATTGCTGTCATGTCTGCTGAAGAAGATCGTTTGTGGAACATTGTAAGAGCTAATTCATTAGATTTTACTTCTTGGACTTCTTTGATTGAAGAGACAGAGAAGGTTGCAGAGGACAACATTTTGAAGATTCGGAGAGTTTATGATGCTTTTCTAGAAGAATTTCCTTTGTGCTATGGTTATTGGAAGAAATATGCTGACCATGAGGCACGTGTTGGCTCCGTTGATAAAGTTGTTGAAGTTTATGAACGTGCTGTTCAAGGTGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACTTATGGGGATCCAGAAACAGTTCGTAGGCTTTTTGATAGAGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCTCTTTGGGATAAATACATTGAATATGAGTACATGCAGCAAGACTGGGGTCGCCTTGCCACGATCTACACCAGGATATTAGAGAATCCTAATCAGCAATTGGATCGTTATTTGAGCAGCTTCAAGGAGTTAGCCGGAAATCGACCATTGTCAGAATTACGGATTGCTGATGAAGCTTCTGGGGTGGCAGGTGCTGCCTCAGAGACAGCTGGCCAGACTATTGAGGGCGAAGTCCGTCCTGATGGTGCAGAGAATTCTCCTAAATCTGTAAGTGCTGGCTTAACAGAAGCAGAAGAGTTGGAGAAGTATATTGTAATTAGAGAAGAGATGTATAAGAAAGCTAAGGAGTTCGATTCTAAGATCATTGGTTTTGAAGCAGCTATCCGGAGGCCCTACTTTCATGTACGGCCCCTTAATGTTGGAGAGCTTGAGAATTGGCATAACTATTTGGATTTTATAGAAAGGGAAGGCGACTTAAGCAAGATTGTCAAGTTGTATGAGAGATGTGTCATTGCATGCGCCAATTATCCCGAGTACTGGATACGCTATGTTTTGTGTATGGAGGCCAATAAAAGTATGGATCTTGCAAATAATGTTCTTGCCCGGGCAACCCATGTCTTTGTGAAGAGACAGCCCGAGATACATCTCTTTAGTGCTCGATTCAAGGAAGAGAATGAAGATATAACTGGTGCTAGAGCTGCCTATCAACTTGTGCATGCTGAAATTTCTCCTGGTCTTCTTGAAGCAATAATCAGACATGCTAATATGGAATATCGATTGGGGAAGTTGGAGGATGCCTTCTCCCTATATGAACAGGCCATTGCCATTGAGAAAGGAAAAGAACATTCACAAACATTGCCATTGTTGTTTGCTCAGTATTCTCGATTTGTTTTTCTGGTTTCTGGTAATGCAGAAAAGGCGAGGCAGATTCTAGTTGAAGGGCTTGAGAATGTTTTGATGTCAAAGCCACTTATTGAGGCTTTATTGCATTTTGAGGCTATTCAACCCTGGCCAAAACAAGTTGATATTGACTTTCTAGACTCGTTGGTTGTCAAATTCATTATGCCCAATGCTGAGAGCCCTAATGTAGCAAGCGCGGTCGAGCGTGAGGAACTTTCAAGCATTTATCTGGAGTTTTTAAATCTCTTTGGAGATGTTCAGTCTATCAAGAAGGGTGAGAATAGGCATGCCAAACTGTTCTTTCCGCATAGGAGCACGTCAGAGTTGAGAAAACGTCATGCAGATGATTTGTTAACTTCAGATAAAACAAAAGTTGCAAGAACTTATTCTGTTCCATCACCCGCTCAACCTGTGGTGGGTACATATCCAAATGCCCAGAATCAGTGGACTAATTATGGCGTTCAACCTCAAGCTTGGCCTCCGGCCACGCAAGCACAAGGACAACAATGGACTGCTGGCTACACCCAGCAGGCTTCATACGGGGCTTATGCAGGTTATGGGGGCAACTATGCAAACCCACAGTTGCCTGCACCAGTCCCTCAAAGTGTTCCATATGCCGGTGCCTACCCTCCTGCATATCCTGTACAGGCGGCGGCGGCGGCGGTTCCTCAACAAAATTATGCACAACCAGTTGCAGCTCCTCCTCCTCCTGCACAGCAACCTGCAGCAGTTCCCCAGGCCTATTATGGAACAACTTATTACTAA 2463 0.4389 MGDSETVVAEASAAEVYASAGHADTAMNPVLEAGQTITDSAGEGAEGNSTYGFGYSNAGDGTYAGDPNSVLQAQFSATDDNKQAVGMIGTDEASGRLGNAATEPVQVSEYNSAVNGSVVGAMGNATGHENGNAVENIAVMSAEEDRLWNIVRANSLDFTSWTSLIEETEKVAEDNILKIRRVYDAFLEEFPLCYGYWKKYADHEARVGSVDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPETVRRLFDRGLAYVGTDYLSFPLWDKYIEYEYMQQDWGRLATIYTRILENPNQQLDRYLSSFKELAGNRPLSELRIADEASGVAGAASETAGQTIEGEVRPDGAENSPKSVSAGLTEAEELEKYIVIREEMYKKAKEFDSKIIGFEAAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEANKSMDLANNVLARATHVFVKRQPEIHLFSARFKEENEDITGARAAYQLVHAEISPGLLEAIIRHANMEYRLGKLEDAFSLYEQAIAIEKGKEHSQTLPLLFAQYSRFVFLVSGNAEKARQILVEGLENVLMSKPLIEALLHFEAIQPWPKQVDIDFLDSLVVKFIMPNAESPNVASAVEREELSSIYLEFLNLFGDVQSIKKGENRHAKLFFPHRSTSELRKRHADDLLTSDKTKVARTYSVPSPAQPVVGTYPNAQNQWTNYGVQPQAWPPATQAQGQQWTAGYTQQASYGAYAGYGGNYANPQLPAPVPQSVPYAGAYPPAYPVQAAAAAVPQQNYAQPVAAPPPPAQQPAAVPQAYYGTTYY 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1873 820 Gene3D Tetratricopeptide repeat domain 403 697 IPR011990 GO:0005515
Lal1g1873 820 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 130 801 - -
Lal1g1873 820 PANTHER PRE-MRNA-PROCESSING FACTOR 39 130 801 - -
Lal1g1873 820 SUPERFAMILY TPR-like 151 310 IPR011990 GO:0005515
Lal1g1873 820 SUPERFAMILY TPR-like 366 672 IPR011990 GO:0005515
Lal1g1873 820 SMART hat_new_1 174 206 IPR003107 GO:0006396
Lal1g1873 820 SMART hat_new_1 208 240 IPR003107 GO:0006396
Lal1g1873 820 SMART hat_new_1 243 278 IPR003107 GO:0006396
Lal1g1873 820 SMART hat_new_1 423 455 IPR003107 GO:0006396
Lal1g1873 820 SMART hat_new_1 568 600 IPR003107 GO:0006396
Lal1g1873 820 SMART hat_new_1 527 565 IPR003107 GO:0006396
Lal1g1873 820 Gene3D Tetratricopeptide repeat domain 149 315 IPR011990 GO:0005515
Lal1g1873 820 MobiDBLite consensus disorder prediction 330 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1873 Lal-Chr1 21020599 21028975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1873 K13217 - gmx:100787373 1228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1873 1 21020599 21028975 Lal1g1873 1 21020599 21028975 ECH
Lal11g1084 11 14529878 14538655 Lal1g1873 1 21020599 21028975 LSH