Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1084 ATGGGAGATAGTGAAACAGTAGTTGCTGAAGCATATGCAGCTGAGGTGTATTCTTCAACTGGGAATGCTGACACTGTCATGAATCCAGTTCCGGGGGCAGGTCAGGCCGTTGCTGAGTTTGCCAGAGAAGGCGCTGAGGGTAACTCAACATATGGGTTTGGTTATTCTAATGCTGGTGTTGGGAATGCATACGCTGGGGATCCTAATTCTGTTCTACAAGCACAGTTCAGTGCAACAGATGATAATAAGCAAGCTGTTGGTGCGACTGGTACTGTTGAAGCCTCTGGTGGGCTTGGAAATGCAGCTACAGAGCCTGCTCAAGTTTCTGAGTATAATTCAGCTGCAAATGGCAGTGTTATTGGTGCTGCGGTTAATGCTACAGGACATGAAAATGGGAATGCAATGGAGAATGTTGATGGGCCAGGTGATGAAAAACAGCTTGCAGATGGTTACACTGTCATGTCTGCTGAAGAAGATCGACTGTGGAACATTGTAAGAGCTAATTCATTAGATTTTACTGCTTGGACTGGCTTGATTGAAGAAACGGAGAAGGATGCAGAGGACAACATATTGAAGATTCGAAGAGTTTATGATGCTTTTCTAGCAGAATTTCCTTTGTGCTATGGTTATTGGAAGAAATATGCTGACCATGAGGCACATGTTGGCTCTGTTGATAAAGTTGTTGAAGTTTATGAACGTGCTGTTCAAGGGGTTACGTATTCGGTGGACATGTGGTTGCATTATTGCATATTTGCCATAAGCACTTATGGGGATCCAGAAACAGTTCGTAGGCTTTTTGAAAGAGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCTCTTTGGGATAAATACATTGAATATGAATACATGCAGCAAGACTGGGGTCGCCTTGCCATGATATACACCAGAATTTTAGAAAATCCTAATCAGCAATTGGATCGTTATTTCGGCAGCTTCAAGGAGTTAGCAGGAAATCGACCGTTGTCAGAATTACGTACTGCTGATGAAGCTGTTGTGGTGGCCGGTGCTGCTTCAGAGACTGCTGGCCCGACTATTGAGGGAGAGGCCCGTCCTGATGGTGTAGAGAATTCTCCTAAACCTCTAAGTGTTGGCTTAACAGAAGCAGAAGAGTTGGAGAAGTATATTGCCAGTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATTCGGAGGCCCTACTTTCATGTACGGCCTCTTAATGTTGGAGAGCTGGAGAATTGGCATAATTATCTAGATTTTATAGAAAAGGAAGGCGATTTAAGCAAGATTGTCAAGTTGTATGAAAGATGTGTCATTGCGTGTGCCAATTATTCCGAGTACTGGATTCGTTATGTTTTGTGTATGGAAGCCAATGGAAGCTTAGATCTTGCAAATAATGTTCTTGCCCGGGCAACACAAGTCTTTGTAAAGAGACAACCTGAGATACATCTTTTTAGTGCTCGATTCAAGGAAGAAGCCAAAGATATAGCTGGTGCTAGAGCTGCCTATCAACTTGTGCATGCTGAAATTTCTCCTGGTCTTCTTGAAGCAATAATTAGGCATGCTAATATGGAATATCGACTGGGGAAATTGGAGGATGGTTTCTCCTTGTATGAACAGGCCATAGCCATTGAGAAAGGAAAAGAACATTCACAAACATTGCCAATGTTGTTTGCTCAGTATTCTCGATTTGTTTATTTGGCTTCTGGAAATGCAGAAAAGGCGAGGCAGATTCTAGTTGAAGGTCTTGAGAATGTTCTGATGTCAAAACCACTTATTGAGGCTTTATTGCATTTTGAGGCTATTCAACCCTTCCCAAAGCGAGTTGATATTGACTTTCTAGATTCATTAGTTGTCAAATTCATAATGCCCAACCCAGAGAGCCCTAATGTAACAAGTGCAGCCGAGCGTGAGGAACTTTCAAGCATTTATCTGGAGTTTTTAAATCTCTTTGGGGATGTTGAATCTATCAAGAAGAGTGAGAATAGGCATGCCAAACTGTTCTTGCCGCATAGGAGTATGTCAGAGTTGAGAAAACGTCATGCAGAGGACTTATTAACTTCAGATAAAACAAAAGTGGCAAGAACTTATTCTGTTCCATCACCTGCCCAACCTGCGACAGGTGCATATCCAAATGCCCAGAGTCAGTGGACTAGTTATGGAGTTCAACCTCAAGCTTGGCCTCCGGCCACGCCAACACAAGGACAACAATGGACTGCTGGCTACACCCAGCAGGCTTCATATGGGGCTTATGCGGGTTATGGGGGCAACTATGTGAATCCACAGGTGCCTGCATCAGTTCCTCAAAGTACTCCATATGGTGGTGCCTATCCTGCATATCCTGTGCAGGGTGCAGTTCCTCAACAAAATTATGCACAACCTGTTGCAGCTCTTCCGCCTCCTCCTGCACAACAACCAGCTGCAGTTCCCCAGGCTTATTACGGAACTACTACTTATTACTGA 2499 0.4334 MGDSETVVAEAYAAEVYSSTGNADTVMNPVPGAGQAVAEFAREGAEGNSTYGFGYSNAGVGNAYAGDPNSVLQAQFSATDDNKQAVGATGTVEASGGLGNAATEPAQVSEYNSAANGSVIGAAVNATGHENGNAMENVDGPGDEKQLADGYTVMSAEEDRLWNIVRANSLDFTAWTGLIEETEKDAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEAHVGSVDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPETVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWGRLAMIYTRILENPNQQLDRYFGSFKELAGNRPLSELRTADEAVVVAGAASETAGPTIEGEARPDGVENSPKPLSVGLTEAEELEKYIASREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEKEGDLSKIVKLYERCVIACANYSEYWIRYVLCMEANGSLDLANNVLARATQVFVKRQPEIHLFSARFKEEAKDIAGARAAYQLVHAEISPGLLEAIIRHANMEYRLGKLEDGFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVLMSKPLIEALLHFEAIQPFPKRVDIDFLDSLVVKFIMPNPESPNVTSAAEREELSSIYLEFLNLFGDVESIKKSENRHAKLFLPHRSMSELRKRHAEDLLTSDKTKVARTYSVPSPAQPATGAYPNAQSQWTSYGVQPQAWPPATPTQGQQWTAGYTQQASYGAYAGYGGNYVNPQVPASVPQSTPYGGAYPAYPVQGAVPQQNYAQPVAALPPPPAQQPAAVPQAYYGTTTYY 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1084 832 SUPERFAMILY TPR-like 380 684 IPR011990 GO:0005515
Lal11g1084 832 SMART hat_new_1 222 254 IPR003107 GO:0006396
Lal11g1084 832 SMART hat_new_1 582 614 IPR003107 GO:0006396
Lal11g1084 832 SMART hat_new_1 257 292 IPR003107 GO:0006396
Lal11g1084 832 SMART hat_new_1 188 220 IPR003107 GO:0006396
Lal11g1084 832 SMART hat_new_1 437 469 IPR003107 GO:0006396
Lal11g1084 832 Gene3D Tetratricopeptide repeat domain 163 329 IPR011990 GO:0005515
Lal11g1084 832 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 10 811 - -
Lal11g1084 832 PANTHER PRE-MRNA-PROCESSING FACTOR 39 10 811 - -
Lal11g1084 832 SUPERFAMILY TPR-like 165 324 IPR011990 GO:0005515
Lal11g1084 832 Gene3D Tetratricopeptide repeat domain 417 711 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1084 Lal-Chr11 14529878 14538655 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1084 K13217 - gmx:100787373 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1084 11 14529878 14538655 Lal11g1084 11 14529878 14538655 ECH
Lal11g1084 11 14529878 14538655 Lal1g1873 1 21020599 21028975 LSH