Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1872 TTCAAAATAGTTCAATCTGAAGGGAACTTAGAAGACTTAGCCTTCACTTCTTTCAACAACAATAAGGAAGATATATCAAGTTTTATAGACACCCCAACAAGGTTTTCATCAAGACACAAGTACTTAGCACTTGAGACTATTCAATATTTCTCTATTTCAACTCATAAAGGATTGCACAAAGAGGAGGAAGTTGAAGAAGTGGAAAGTGGTTATGAAGATGAGGAAGAAGTAGGAGGAAGATTTGATGGAAGTGTTATGGTATTGAATGAAGAAAAAGTGAGAGTGGAAGATGGATATTGCAGGGTGAGTTTTGATGATGAGGTTGGTGCTAAACAAATGTATCTTGCAAGGGGGCTTGGTATTGATGGCTATGGTGGTGACTGCAAAGGTGGTAGTGGTGGTGGTGGTGGTGGAGGTGGTGACTATAATTCAATGAGCTATGGAGGGAATGGAGGAAATAGGCATGGAGTGGAAGAATATTACAAGAAAATGGTGGAGGAAAATCATGCCAATTCATTGTTTCTGAGGAATTATGCTCAGTTTCTATATCAGTTCAAACAAGATCCTGAAGGAGCCGAGGAATACTACTCGTGTGCCATACTAGCCGATCCGAAAGATGGAGAAGTTCTATCACAGTATGGGAAGCTAGTTTGGGAGGTACATCATGATAAAGAAAGAGCCTCAAGCTATTTTGAAAGAGCAGTTCAAGCCTCTCCTAAAGACAGCCATGTACATGCAGCATATGCTAGTTTTCTTTGGAACACTGAGGAAGGCGAGGACGGTTGCGACTAG 792 0.4091 FKIVQSEGNLEDLAFTSFNNNKEDISSFIDTPTRFSSRHKYLALETIQYFSISTHKGLHKEEEVEEVESGYEDEEEVGGRFDGSVMVLNEEKVRVEDGYCRVSFDDEVGAKQMYLARGLGIDGYGGDCKGGSGGGGGGGGDYNSMSYGGNGGNRHGVEEYYKKMVEENHANSLFLRNYAQFLYQFKQDPEGAEEYYSCAILADPKDGEVLSQYGKLVWEVHHDKERASSYFERAVQASPKDSHVHAAYASFLWNTEEGEDGCD 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1872 263 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 3 261 - -
Lal1g1872 263 SUPERFAMILY TPR-like 158 259 IPR011990 GO:0005515
Lal1g1872 263 PANTHER OSJNBA0004N05.2 PROTEIN 3 261 - -
Lal1g1872 263 SMART hat_new_1 222 254 IPR003107 GO:0006396
Lal1g1872 263 SMART hat_new_1 187 219 IPR003107 GO:0006396
Lal1g1872 263 SMART hat_new_1 152 184 IPR003107 GO:0006396
Lal1g1872 263 Gene3D Tetratricopeptide repeat domain 148 260 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1872 Lal-Chr1 21018622 21019938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1872 - - gmx:100812713 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1872 1 21018622 21019938 Lal1g1872 1 21018622 21019938 ECH
Lal11g1085 11 14539326 14541606 Lal1g1872 1 21018622 21019938 LSH