Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1085 ATGATTCTAGTAAGAAGCTCTTCAACACCAGTTCTTGGTTCACTTTTATCATCTTTCAATGACACTTCTAGTAACAACATTCATCACTCTGAAGCTTCACATTTTGCACTCTTTCATCTACCACCAACTTGTGTCCTTCAACAGAACCAACATCACAAACTTTCTGTTCATCAAAGTCTCTCCACATTCTCATGTAGTTCTTCTCCAATCTCTCCCTCAAATGGTGACTTTGAAAGACAAAACAAAGGCTTCAGAAGAGCTCAATCTGAAGGGAACTTGGAAGAATTAGCTTTCAATTCCTTCAACAACAAGGAAGATAAATCAAGTTATCTACACACCCCAACAAGATTTTCAGCTAGGCACAAGTACTTGGCACTTGAGGAGGAAGATGAAGAAATGGAAAGTGATATTGAAGATGAGGAGGAAGAGATAAGAGCAATTGAAGGAAGAGTTGTTGGCACTGGCAGTGGTATGGTATTGAGTGAGGAAGATAGAGTGAAGGATGTAATTCGCGGGCTGAGTTTCAATGAGGTTGGTGGTAAAGAAATGTATCTTGCAAGGGGGCTTGGTATTGATGTATATGGTGATGGCATAGGTGGCCACAGAGGTGGTGGTGGTGGAGGCGGCAGAGGTGGCGGAGGTGGTGATTATAATTCCATTAGTTCTGGAGGGAATGATGGAAATATGCAGGGAGTGGAAGAGTATTACAAGAAAATGGTGGAGGAGAATCCTGGTAACCCATTGTTTCTGAGGAATTATGCTCAGTTTCTGTATCAGAACAAAGAAGATCCTGAAGGGGCTGAGGAGTATTATTCCCGCGCCATACTAGCCGATCCAAAAGATGGAGAAGTTCTATCACAATATGGTAAGCTAGTTTGGGAGCTACATCATGACCAAGAAAGAGCCTCAAGCTATTTTGAAAGAGCAGTTCAAGCCTCTCCTGAAGACAGCCATGTACATGCAGCATATGCTAGTTTCCTTTGGGACACAGAGGAAAGCGAGGACAGTTGCGATATGTCACAATGTTTACCACCGCGATTTCATCACGGAGCTCTGGCTATAGCAGGTGCTTAA 1074 0.4292 MILVRSSSTPVLGSLLSSFNDTSSNNIHHSEASHFALFHLPPTCVLQQNQHHKLSVHQSLSTFSCSSSPISPSNGDFERQNKGFRRAQSEGNLEELAFNSFNNKEDKSSYLHTPTRFSARHKYLALEEEDEEMESDIEDEEEEIRAIEGRVVGTGSGMVLSEEDRVKDVIRGLSFNEVGGKEMYLARGLGIDVYGDGIGGHRGGGGGGGRGGGGGDYNSISSGGNDGNMQGVEEYYKKMVEENPGNPLFLRNYAQFLYQNKEDPEGAEEYYSRAILADPKDGEVLSQYGKLVWELHHDQERASSYFERAVQASPEDSHVHAAYASFLWDTEESEDSCDMSQCLPPRFHHGALAIAGA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1085 357 Coils Coil 123 150 - -
Lal11g1085 357 SMART hat_new_1 262 294 IPR003107 GO:0006396
Lal11g1085 357 SMART hat_new_1 227 259 IPR003107 GO:0006396
Lal11g1085 357 SMART hat_new_1 297 329 IPR003107 GO:0006396
Lal11g1085 357 PANTHER OSJNBA0004N05.2 PROTEIN 3 340 - -
Lal11g1085 357 MobiDBLite consensus disorder prediction 205 228 - -
Lal11g1085 357 Gene3D Tetratricopeptide repeat domain 222 339 IPR011990 GO:0005515
Lal11g1085 357 SUPERFAMILY TPR-like 227 337 IPR011990 GO:0005515
Lal11g1085 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 3 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1085 Lal-Chr11 14539326 14541606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1085 - - gmx:100812713 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1085 11 14539326 14541606 Lal11g1085 11 14539326 14541606 ECH
Lal11g1085 11 14539326 14541606 Lal1g1872 1 21018622 21019938 LSH