Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1817 ATGGGTAGTAATAGTAGTTCGTGGTTTGATTCATCACCAAAAAGGGTTCATAGAAGGGTTTGGTTAATTTTCCAAAATTCAATGGGTGTCCTCGTGGGTGGAAATCACACCTCATCTAGTCTCAAATTTTCTCTTCAATTTGAGCCCAAATTCGAGAATTTAATGGATACCAAGAGCTTCAAATTCCACATCTTTTATGGGTCTATTGCAAGACCCGTGTTCTTTCGCTTAATCATGCTTGTCTCTGCTGTTTCCATCGTTTCATTGCTCAATGCAATGTCAAAATATGATCTTGCATCATTGGCAACCTTTAATGACTGCATTGCAATATCGAATTTGCAAGTCGAAAACGTTACTTTGAGCCCGGGTTCTTACTTGTTTCAAAGAAGGGTGCTTAGCACCTTTTGGGGCTCATTTGATTCAATGAATTGCACAAAAGATGCAAACTTGACTGTGAATGTGATCAATGAGTTAATGGGCAAGCAGATTTTGAATTATGGAGCAAAAAGCTTATGTATTGGAGAAGGGTCTTCAATGGCCGTTATGGCAATGAAAAAGTTAGGATTCTCCAGTGTTATTGGTGTCCAAAGACACAGCTTTTTCTCCCTTATGCAGAAGAAGATTGTGTATGAGCTTGATTACAAGGATGGTTCATTTGATTTTGTGGTATCTAGGGACCTTGACAAGGTTTCAGTTTCTGCAATGCTTGTGCTTGAGGTTGAAAGAATCCTTAAGCCTGGTGGAATTGGTGCACTTCTTATTGGTTCCACTGGTTCCAACTCCAATGATTTGATAAGATCTGCTACACAAGTTTCTTCACTGCTTAGATCTTCAAGTGTTGTGTATGTTGGTTATGTTGATCAACTTAACCTTGTTGTGTTCAAGAAAAGAACACAAAATGAAAGTGCTTTCTATCAATATAGCATTCCAGAAGATTGTCCAAGTCTCACTTTTACCAAACCCCTCATAGAGCTTATGGAGCCTCTTATGAGTGAAAGGCCAATTCCAATTCCTGAGTATGAGAAAAGTGTTCCTTATTTGCCTAAGTTTATTGATGTTTCTGCTAGGAAGAGACTTGTGTATATTGATATTGGGGTAGGGGAACTTCTGAATGCAAATGTTAGTGATTGGTTCATGCCATCTTATCCCATTGATCAGAAGAATTTCAATGTGTACTTTGTTCACTACAACACTTCAATCATGCTGTCCTATGTGAAGAGACCTGGTGTCATGTTTGTTTATTACCCTGGGTTGGCTGGTAAGGTCGATGCGAATCTCGACCATGATTCCGATGAAGACATGGATCCATATGTGGGAGAGGATGAGTTTGATTTCCTTGCTTGGTTCAAAGAAACTGTGCAATATGCTGATTTTGTAGTTCTGAAAATGAATGCAGGGAAAATTGAAGTGAAGTTCCTGAAGGATGTATTTGAGAGTGGAGCTATATGCTTTGTTGATGAATTGTTTCTTAGGTGCCCTGAAAATGGAAGTGTTGATGATAAAACTATGAATAGCAAGGAAAGTTGCATGGATATCTATAAGGGTCTTAGAAGCAATGGTGTTTATGTTCACCAATGGTGGGGAAACTAA 1590 0.3881 MGSNSSSWFDSSPKRVHRRVWLIFQNSMGVLVGGNHTSSSLKFSLQFEPKFENLMDTKSFKFHIFYGSIARPVFFRLIMLVSAVSIVSLLNAMSKYDLASLATFNDCIAISNLQVENVTLSPGSYLFQRRVLSTFWGSFDSMNCTKDANLTVNVINELMGKQILNYGAKSLCIGEGSSMAVMAMKKLGFSSVIGVQRHSFFSLMQKKIVYELDYKDGSFDFVVSRDLDKVSVSAMLVLEVERILKPGGIGALLIGSTGSNSNDLIRSATQVSSLLRSSSVVYVGYVDQLNLVVFKKRTQNESAFYQYSIPEDCPSLTFTKPLIELMEPLMSERPIPIPEYEKSVPYLPKFIDVSARKRLVYIDIGVGELLNANVSDWFMPSYPIDQKNFNVYFVHYNTSIMLSYVKRPGVMFVYYPGLAGKVDANLDHDSDEDMDPYVGEDEFDFLAWFKETVQYADFVVLKMNAGKIEVKFLKDVFESGAICFVDELFLRCPENGSVDDKTMNSKESCMDIYKGLRSNGVYVHQWWGN 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1817 529 Pfam Methyltransferase domain 209 249 IPR013216 GO:0008168
Lal1g1817 529 PANTHER UPSTREAM ORF PROTEIN, PUTATIVE-RELATED 55 529 - -
Lal1g1817 529 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 169 253 IPR029063 -
Lal1g1817 529 PANTHER PEPTIDE UPSTREAM PROTEIN 55 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1817 Lal-Chr1 20536428 20538107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1817 - - gmx:100806816 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1817 1 20536428 20538107 Lal20g0090 20 571789 573659 LSH