Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1785 ATGGCATCGAAGCAAGAGTTTAAGGAAGATAGAGCTGAGGCTGCTGCAAAACTTGCTGCTAAAGACATTGGTGATGTTAATAGAGAAAGAGAACGTGAAGAAGGGTTTAATCTTAACTCTGAACTGAATTTCAAGCAGGCACGTGCTGAAGCTGCTGCTAAACTTGCTGCTAAGGATCTTGAAGATGTTAATAGAGCAAGAGAACAATATGCATTAGGTGCAGGAGAGCATGAACAGAAACCAGGTCTTATTGGGTCAATGCTGAAAGCTGCAAAAGAAGCTGTGGTTGGAAAGAATAACAATGAAGATAAGGAAGTAAGAGAAAACTCTCCTAACTACACTATACATAAGGCTAAAGATACCTCAGAAAACACAGGGTCTAAGGTTGGAGAATACACAGATTATGCAGCTCAGAAAACAAAAGAAACAAAAGACTATGCTGTGGACAAAGCAAAAGAAGCTAAAGACACAACAATGAACAAAGCTGGTGAATATAAAGATTATACTGTGGAGAAGGCAAAGCAAGCTAAAGATACAACAATGAATAAAGCTGGTGAGTATACAGACTATGCCGCGGAGAAGGCGAAGGAGGCGAAAGATGTGACCGCGGAGAAGGCGAAAGAAGGGAAGGATACTACGGTAGGGAAGCTTGGGGAGTTGAAGGATTCTGCTGCTGATGCTGCTAAAAGGGCTATGGGTTTCTTCAGTGGCAAGAAAGATGAAACAAAGGAAAAGCTGAGTGAAACAGAAGAAGAAGCAAAGAGGAAATTGGAAGAAATGAGAGTGGAAGACAAAGACTACAAAATAAGATCAAACCAAGGTCCAAAGAGTGGAGAAAAGTTGGTGATAGAAATTGAAGAGAGTAGACCAGGTGTTATAGCTGATGCACTCAAAACAGCAGATAGGGCAACAACTCAAGCCATGAATGAGGAAGGTGTCATTCGTGTCGAACGTCGTGAGAAAATGTGA 969 0.4149 MASKQEFKEDRAEAAAKLAAKDIGDVNREREREEGFNLNSELNFKQARAEAAAKLAAKDLEDVNRAREQYALGAGEHEQKPGLIGSMLKAAKEAVVGKNNNEDKEVRENSPNYTIHKAKDTSENTGSKVGEYTDYAAQKTKETKDYAVDKAKEAKDTTMNKAGEYKDYTVEKAKQAKDTTMNKAGEYTDYAAEKAKEAKDVTAEKAKEGKDTTVGKLGELKDSAADAAKRAMGFFSGKKDETKEKLSETEEEAKRKLEEMRVEDKDYKIRSNQGPKSGEKLVIEIEESRPGVIADALKTADRATTQAMNEEGVIRVERREKM 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1785 322 PANTHER - 1 37 - -
Lal1g1785 322 PANTHER - 112 318 - -
Lal1g1785 322 PANTHER - 44 190 - -
Lal1g1785 322 Pfam Late embryogenesis abundant protein 112 154 IPR004238 -
Lal1g1785 322 Pfam Late embryogenesis abundant protein 171 208 IPR004238 -
Lal1g1785 322 Pfam Late embryogenesis abundant protein 200 229 IPR004238 -
Lal1g1785 322 Pfam Late embryogenesis abundant protein 144 187 IPR004238 -
Lal1g1785 322 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 112 318 - -
Lal1g1785 322 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 1 37 - -
Lal1g1785 322 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 44 190 - -
Lal1g1785 322 Coils Coil 239 270 - -
Lal1g1785 322 MobiDBLite consensus disorder prediction 95 128 - -
Lal1g1785 322 MobiDBLite consensus disorder prediction 1 22 - -
Lal1g1785 322 Gene3D - 112 160 - -
Lal1g1785 322 Gene3D - 179 239 - -
Lal1g1785 322 MobiDBLite consensus disorder prediction 96 114 - -
Lal1g1785 322 MobiDBLite consensus disorder prediction 239 258 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1785 - - gmx:547500 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1785 1 20214718 20216970 Lal1g1785 1 20214718 20216970 ECH
Lal1g1785 1 20214718 20216970 Lal12g1013 12 8943122 8945666 PCT
Lal12g1013 12 8943122 8945666 Lal1g1785 1 20214718 20216970 PCT