Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1013 ATGGCGTCAACAAAGCAACAATCTAAGGAAGCGGAGGCAGCAGCTAAGGTTGCTGCAAAAGAACTTGAGGAAGTTAATAGAACAAGAGATCGTGATTTGGGTTCTGTTGACAAGCAACAACAAGATGAACAAAAACCTGGTGTTATTGGTTCCGTGCTGAGAGCGGTGCAAGGCACGTATGAGAATGCAAAGGAAGCTGTGGTTGGAAAAGGTGACTACCCTGTTGAACCAAACACTACTACGAGGGAAGTAGTGTATGTTACTAATGATGATGATTTAGGAACCGGTGAAGTGAGAGATATATCAGCAGATAAGTCTCGTGGGGTATATGATTCTGCAACCGGAAAGGCTAAGGAATACAAGGATTACACAGCTGAGAAAGCAAAAGAGGCTAGTGACAAAGCTGGTTCTAAGGTTGGAGAGTACACAGATTATGCAACTCAAAAGGCAAAGGAGGCTAAAGACACAACAGCGAACAAAGCTGGAGAATACAAGGACTACACAGCTGAGAAGGCGAAAGAGGCGAAAGACGCGACGATGAATAAGGCTGGGGAATACAAGGACTATGCGGCAGAGAAGGCAAAGGAGGGAACAAATTACACGACGGAGAAGGCGAAGGAAGGTAAGGACACTACGGTGGGGAAGCTTGGGGAGTTGAAGGACACTGCAGCTGGTGTAGTGAAAAGAACTATAGATTACTTGGGTGGTAAGAAAGATGAAACTGTGAATAAGACTGCAGAGACATGGGAAGCAGCTAAGGATAAGAGTGCTGATGCAGCTGAAGCGGCTAAGAATAAGAGTGCAGAGACATGGGATGCAACTAAAGATAAGAGTGCTAATGCAGCTGAAGCGGCTAGACAGAAGGCTTCGGAGACGGCTGAGGCTGCGAAGAATAAGAGTGCAGAGACATGGGATGCAACTAAGAATAAGAGTGCTGAAGCAGCTGAGGCGGCTAAGAATAAAACTGCTGAGACTACGGAGGCTGCCAAACAGAGAGCGTGGGAGGCTAAAGAAGCCGCAAAGAATAAGAGTGCTGAGACATGGGATGCAACTAAGAATAAGAGTGCTGAAGCAGCTGAGGCGGCTAAAAATAAGAGTGCTGAGACTGCGGAGGCTGCCAAACAGAGAGCGTGGGAGACTAAAGAAGCCGCAAAGAATAAGAGTGCTGAAGCAGCTGAGGCCGCAAAGAATAAGAGTGCTGAGACTGCGGAGGATGCCAAACACAAAGCGTGGGAGGCTAAAGAAGCAGCCAAGAATAAGACTTCTGAGACGACGGAGGCTGCTAAAAACAGAGCATGGGAGGCTAAGGAAGCAGCCAAGGAAACGGTGGGTGGAAACGAGGAAGAAACAAGGAGGAAAGTGGAAGGACTAAATATTGGAGATAAAGAATACATCGATGGAAGTGGAGTGGCGCGTGGAGGAGACAAGGTGAGAATCAAAGTCGAAGAGAGTCGACCAGGAGCGGTGGCGGAAACGTTGAAAGCCGCAGATCAGATGACGGGTCAAACTTTCAACGATGTTGGACGCTTGGATGATGAAGTCGTTACTACTCGGTTGGACCGCCGTACATGA 1572 0.4777 MASTKQQSKEAEAAAKVAAKELEEVNRTRDRDLGSVDKQQQDEQKPGVIGSVLRAVQGTYENAKEAVVGKGDYPVEPNTTTREVVYVTNDDDLGTGEVRDISADKSRGVYDSATGKAKEYKDYTAEKAKEASDKAGSKVGEYTDYATQKAKEAKDTTANKAGEYKDYTAEKAKEAKDATMNKAGEYKDYAAEKAKEGTNYTTEKAKEGKDTTVGKLGELKDTAAGVVKRTIDYLGGKKDETVNKTAETWEAAKDKSADAAEAAKNKSAETWDATKDKSANAAEAARQKASETAEAAKNKSAETWDATKNKSAEAAEAAKNKTAETTEAAKQRAWEAKEAAKNKSAETWDATKNKSAEAAEAAKNKSAETAEAAKQRAWETKEAAKNKSAEAAEAAKNKSAETAEDAKHKAWEAKEAAKNKTSETTEAAKNRAWEAKEAAKETVGGNEEETRRKVEGLNIGDKEYIDGSGVARGGDKVRIKVEESRPGAVAETLKAADQMTGQTFNDVGRLDDEVVTTRLDRRT 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1013 523 Gene3D - 96 142 - -
Lal12g1013 523 Gene3D - 143 187 - -
Lal12g1013 523 MobiDBLite consensus disorder prediction 323 350 - -
Lal12g1013 523 MobiDBLite consensus disorder prediction 367 455 - -
Lal12g1013 523 Coils Coil 279 299 - -
Lal12g1013 523 MobiDBLite consensus disorder prediction 14 39 - -
Lal12g1013 523 MobiDBLite consensus disorder prediction 1 50 - -
Lal12g1013 523 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 155 280 - -
Lal12g1013 523 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 272 412 - -
Lal12g1013 523 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 1 167 - -
Lal12g1013 523 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 400 518 - -
Lal12g1013 523 Pfam Late embryogenesis abundant protein 165 197 IPR004238 -
Lal12g1013 523 Pfam Late embryogenesis abundant protein 121 164 IPR004238 -
Lal12g1013 523 Pfam Late embryogenesis abundant protein 198 224 IPR004238 -
Lal12g1013 523 Gene3D Apolipoprotein 188 335 - -
Lal12g1013 523 MobiDBLite consensus disorder prediction 250 455 - -
Lal12g1013 523 PANTHER - 400 518 - -
Lal12g1013 523 PANTHER - 1 167 - -
Lal12g1013 523 PANTHER - 155 280 - -
Lal12g1013 523 PANTHER - 272 412 - -
Lal12g1013 523 Coils Coil 1 28 - -
Lal12g1013 523 Coils Coil 381 409 - -
Lal12g1013 523 Coils Coil 356 376 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1013 - - vun:114189667 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1013 12 8943122 8945666 Lal12g1013 12 8943122 8945666 ECH
Lal1g1785 1 20214718 20216970 Lal12g1013 12 8943122 8945666 PCT
Lal12g1013 12 8943122 8945666 Lal1g1785 1 20214718 20216970 PCT