Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1779 ATGCATTCAGGTCATTTACTTCTTGAGGAACCCATTCGAATGGCCTCTATCCTCGAATCTTCTAAGCCCAGTTTCTTCCCTGCAATGACAAAGATTGTAGGTACCCTTGGTCCCAAATCTCGTTCACTTGAGGTTATCTCTGACTGTCTCAATGCTGGAATGTCTGTGGCTCGGTTCGACTTCTCTTGGGGCGACCCTGATTATCACCAGGAGACTTTGGAGAATTTGAAGGCTTCTATCAAGACTACTAAGAAGCTCTGTGCTGTTATGCTCGACACGGTCGGCGCAGAGATGCAAGTTGTTAATAAAAATGAGACACCAATCTCCCTTCAAGAAGATGCTGAGGTTGTCCTCACTCCTCATGAAGGACAAGAAGCCTCTTCAGAGACACTGCCTATCAACTTTGATGGACTAGCCAAGTCAGTGAAGAAGGGAGACACCATTTTTGTTGGTCAATACTTGTTTACAGGAAGTGAAACTACTTCTGTATGGCTAGAGGTAGATAGCGTCAAAGGGAAGGATGTCGTTTGTACTATTAAGAATTCAGCAACACTGGCTGGATCATTGTTCACTTTGCACGCGTCTCAAATTCATATTGATTTGCCAACCCTCTCTGAGAAAGACAAGGAGGTTATAAGCACTTGGGGAGTCAAAAACAAAATTGATTTTCTGTCGTTGTCATATACTAGGCACGCTGAAGATGTTCGCCAAGCCCGTGAATTCCTTTCTAAGTTAGGTGATCTCAGCCAGACTCAAGTTTTTGCAAAGATTGAAAATGTTGAGGGATTGACCCATTTTGATGAGATTCTACAAGAAGCAGATGGCATTATCCTTTCCCGTGGGAATTTGGGCATTGATCTTCCACCCGAGAAGGTGTTTTTGTTTCAAAAATCTGCCCTTTACAAGTGCAACATGGCTGGGAAACCTGCTGTTGTTACACGTGTTGTGGATAGCATGACTGACAACTTACGACCAACTCGTGCAGAAGCCACTGATGTTGCCAATGCTGTTTTAGATGGAAGTGATGCAATACTTCTGGGTGCTGAGACTTTACGTGGGTTATATCCTGTTGAGACTATTTCTACTGTTGGCAAAATTTGTTCAGAGGCTGAGAAAGTTTTCAATCAAGACCTCTATTTTAAGAAGACAGTGAAACATGTTGGAGAACCCATGACCCACTTGGAATCTATTGCATCCACTGCGGTACGAGCAGGTATTAAGGTGAAGGCCTCTGCTATCATTTGCTTCACTTCATCTGGAAGAGCTGCAAGATTGATAGCGAAGTATAGGCCAACAATGCCAGTTCTCTCTGTTGTGATCCCCCGAATTATAACAAATCAACTAAAATGGAGCTTTATTGGAGCTTTTGAGGACCAAGTAGGAACTGATATGTGGGAAAGCTTATTTACAACTAATGCAAGGCAATCACTTATTGTTAGAGGTCTCTTTCCCATGCTCGCTGATCCCCGACATCCCGCCGAATCAACTAGTGCGACTAACGAGACTATTCTGAAGGTAGCTCTTGATCATGGAAAATCGAAAGGAGTTATAAAGTCGCATGATCGAGTTGTTGTTTGCCATAGAGTTGGTGATGCATCTGTTGTCAAGATTATCGAGCTTGAAGATTAA 1629 0.4316 MHSGHLLLEEPIRMASILESSKPSFFPAMTKIVGTLGPKSRSLEVISDCLNAGMSVARFDFSWGDPDYHQETLENLKASIKTTKKLCAVMLDTVGAEMQVVNKNETPISLQEDAEVVLTPHEGQEASSETLPINFDGLAKSVKKGDTIFVGQYLFTGSETTSVWLEVDSVKGKDVVCTIKNSATLAGSLFTLHASQIHIDLPTLSEKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTQVFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICSEAEKVFNQDLYFKKTVKHVGEPMTHLESIASTAVRAGIKVKASAIICFTSSGRAARLIAKYRPTMPVLSVVIPRIITNQLKWSFIGAFEDQVGTDMWESLFTTNARQSLIVRGLFPMLADPRHPAESTSATNETILKVALDHGKSKGVIKSHDRVVVCHRVGDASVVKIIELED 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1779 542 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g1779 542 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g1779 542 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g1779 542 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g1779 542 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g1779 542 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g1779 542 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g1779 542 PANTHER PYRUVATE KINASE 2 542 - -
Lal1g1779 542 TIGRFAM pyruv_kin: pyruvate kinase 30 449 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g1779 542 Pfam Pyruvate kinase, alpha/beta domain 395 537 IPR015795 -
Lal1g1779 542 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Lal1g1779 542 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Lal1g1779 542 Gene3D - 363 540 IPR036918 -
Lal1g1779 542 SUPERFAMILY PK C-terminal domain-like 389 530 IPR036918 -
Lal1g1779 542 Gene3D - 30 362 IPR040442 -
Lal1g1779 542 PANTHER PYRUVATE KINASE 2 542 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g1779 542 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 6 375 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1779 Lal-Chr1 20168151 20174823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1779 K00873 - gmx:100781158 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1779 1 20168151 20174823 Lal1g1779 1 20168151 20174823 ECH
Lal1g1779 1 20168151 20174823 Lal12g1038 12 9650270 9660846 PCT
Lal1g1779 1 20168151 20174823 Lal24g0949 24 8008853 8019122 PCT
Lal12g1038 12 9650270 9660846 Lal1g1779 1 20168151 20174823 PCT
Lal24g0949 24 8008853 8019122 Lal1g1779 1 20168151 20174823 PCT