Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1675 ATGTCGACGGCGACGGTGCACCTCCGATCTCCGATCAACACTTCCTCTGTCGATTCCACCTCTTACTCTCCTCCTCCTCCACAACCTCTTCATCAAACTCCTTTCCCTCATTTCAACGCTGACACCTTACCTTCTTTCTCCACCGCACGCGCGAGATCAAAGCCGCGCCTCGTCAAGCTGAGGAAACAGTCCGCAAAGTCCAGAACCATAACCGCCGCCTCCGGATTCAATCCTTTTTGCACCGATCAGGTAACCGTTAATGCTGTTAGTGATGATAGTTCTTGCAAGTTTGGGGACACTGGTTTTGTGTTCTCCGCTTCTGTTTCTGGTAGGGATTTGAATTGCGAGCAGAAAGAAGCTTCGAAAATTGAGAAGGAAATGGAGATTAGGAATAGTGGTGATGTGGAATTTGTGTTTAGTGCTAAAGGGAGTGAGGTGGAATCGAATCCGCGGAAAAATGAAGCGAGGATTGTTTCTGGCGAGGGAGAGTTTAATAGTAAGGGTTTTGTTTTTAATTCTAAGGGAAACAATTTGGTTTCTAATTCTAATTCAGAAAAGGGAAAATCTAGTGAGGTTGAGTGTGAAAGGCCGAAGTGTTTTGATTTTGTTTTCAGTGACAATCGCTGCGGTAAAGCGTCAAATTTTAATGTGGAAAAGCAGGAGTCTCTTGGCGCCATTAGAAAATCAGATAGTGTTACCAGAAAAAATGAAGATGCTCATCAGAATGGTCATTTGGGTAATGTTGATATTGATAAAGGTAAGAGTGCATGTGGAAGTAGTAATTGTAGTTCTACTGCTTATAGTATCTTTCCTTCGTATAAATTAACTGATGAAATGAAGAAACTGAACATCAACCAATCTGAGGGTGCTGGTATCGATAGGGGTTCTACTAATCCACATGTAAATAGTAGTGCTGGTTTTGTGTTTGGAGGAAGTGAGAAGGGCTGTGGCAATTTTGGTGTTAGTTCTGGAACTAATTCTAGTCGTCAAGAGTCTTGTACTGATGCTACTTCTGAGAATATTGGTGGGAAGTTTTTCAAAGAATGTGAAAGGAATGATGTTCAAAATGGAACTGGTTGTGGTATTACATGTAGTTCTGCAGGTATCCCTTGCTCTAAGCCATCTACTAGAGACGAATGTATCAGACAATTTCTGTTTGGAAAGATTCCAGTATCTGAAGAATCACAACTGAACGGAGCTACAGAACAATTTTCCTCCTCATCATTTGGTCTGGACTCCATTCGAAATAATTATGCTTCCACTGGCCATCCCTTTAGTGAGGGTCATGATAAGAGCAACAGTTGTTTTACAAGAACCCCAGACACGTCAAAGGAGTCTTTTATGGACTTCAAACCCCCAACTTGGGATCCTTCTTGTTTTAAAGATAACTTATTTCCTGAGTTGAGTAAAAAATCTGAATTGACAAAAAAGGGAAGATCTTCTAAAGAAAAAGGATCAAAACACACAAGGAGAAAATTGAAGTCACATTCCCTGAATAAGAAACCTACAAGTCTGGATCATTTGTTAAAGGAAAACAGTTCCCTTGAATCCCCACATTGTTCTGGTAGCCACTCACCCATGGATTTTTCTCCCTATCAAGAAACAAGAGCAGATGATCTAGATGTAAAAGCATCAGAAGAATTAAATGATCTGCACTCAAAATTTTCCACTGATTATAAAGATGAACCCTTTGCTTCTGCAAACAGAGCAGTAGATACTAATACAACTGATCAAAGACACAGAGATCTAGATAGCGGCAAGTTATTGTCATGCAATGGAAGTCCCTGTGTTGGGGATTTTCATTCTTCTGTCCCTGAATTAGTCTGGCCTAGTTTGAAAACCAAGCAGTTCAGCATTAGTGTAGTAGGTGCTTCAGTAGATGCTGGGATTGACTTTAGCTCAAACACCGAAAAGCATAAAGCTGATCTATTTTGTTTTGTTCATGGTCCGGGTGATTCAAAGGAGACAGATTTTGCATTTTCTGTGTCATCAACTGTACATGGGACTTCTTCATTTAAGTGTAAACAGAAGAAGAAATATAGAAGGGGAAAGGGCCGCAACACATTTGCTATATCTCCAAATATGAATGGAAAGTTTGAATCTTCTGTTCAATTTTCACCACTCACTACTGTCAACATGTCATCACAATCTGATGGGATGAATAGGCCTCAGACACATGACCAGTTCAATGAAGAGGGTATTGCATACTCATCTGCAATTCATGAAGCTTGCGAAAAGTGGAGAGTCAGGGGAAACCAAGCATATAAAGATGGGGATCTTTCTGAAGCTGAGGACTTCTACACACTAGGAATAAATTCTGTCCCCTCAAGTGAAAGATCAGGATGTTTGATTAAGCCCCTTTTACTATGCTATAGCAACCGCGCAGCCACACGCATGAGACTTGGAAGGATTAGAGAAGCTCTGGGGGATTGCCAGTTGGCTACTGCTGTGGACCCTACATTTCAGAAAGCACAAATGAGAATTGCTAACTGTCACCTTTTGCTAGGAGAAGTAGAAAATGCTCAGCAATGTTTTAAAAAGTGCATGGAATCAGGTAGTGTTGTTTGCTTGGATCGAAGAGTCATGGTAGAAGCAGCTGAAGGGTTACAGAAGGCTCAGAAAGTGGAGAAGTGTATAAATGGTGCTGCTGAACTTTTGAAGAAGATGACTTCTGATGCTGCCGGTAATGCTTTGGAATTACTTACAACAGCATTGTCAATAAGTTCATACTCAGAAAAATTGCTTCAAATGAAAGCAGAGGCTCTATGTTTGCTGCAAAAGTATGATGAAGCAATTCAGGTTTGTGAACGTAGCCAATATCTTGCAGAAAAGAACTCTGTTGCCTTGTTAAACAGTGGCAACGATTCCAATATTTCCATGTGTGATAGTTATTCATCTGTAAACTTGTGGAGGTGGTCATCGATATCTAAGTGTTACTTTCATCTTGGAAAGCTTGAATCATCACTTAACGTTCTTGAGAAATTACAGCAAGTTGTATCTGTCAATGACAGGTGTGTGATTGATTACATTGAAGACTCACTGTCACTAGCTGCTACAATAAGAGAACTTCTAGATCACAAGACTGCAGGAAATGAGAAGTTTAAATTGGGGAAGTATAAAGAAGCAGTGGAGAATTACACTGTTGCTTTATCTAGCAATATCAAATCCCGTCCTTTTGTAGCTATATGTTTCTGCAATCGTGCTGCTGCTCATCAAGCTTTAGGCCAAATTACTGATGCCATTGCAGACTGCAGTATGGCTATGGCCATCAATGCAATGTATGCCAAGGGGAGGGGAGACCTGATTACTGTGGTTTTGCAGGCAATTTCAAGAAGAGCCACCTTACATGAGAAGGTTAGAGATTATGAACAAGCAGCTTGTGACCTTAGGAAACTTATATCTGTTCTTGAAACTCAATCCGATGATAAGACTAAACCATCTGACTCACCAACTGGATCAAATGGAGTTAAAGAATCAAGGAAGGCTCATCAGCGACTGCTTTCTGTGGAAGATCAAGCCAAAAAGCAAATCCCTTTGGACTTTTACCTCATCCTAGGAATTAAAGCAGCTGATTCAGCATCAGATATCAAGAAGTCATATCACAAGGCAGCTCTCAGACATCACCCGGACAAGGCCGGACAGTTGCTGCCAAGAAGTGAAAATGGAAATGAAGGCCATGTCTGGAAGGAAATTTCACAGGAGGTGCACAAGGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCATATGCTGTGCTTTCTGACCCTGCCAAGCGCGCAGATTATGATTTGGAAGAGGAGACAAGGAAAGCTTATCAAAGTAGCCGAGGTGGCACATGCAGGAGATCTTCAAATTTTGATGGGTATGGAACACCAACTGGTGTTTATAAATCTCCCTCTGACAAAACTTCTAGCGGACGATATTATGGACAACAATCACAACATCAATGGAAGACACATGGACATTCATATTCATCTTCTCGATGGTAA 3990 0.4108 MSTATVHLRSPINTSSVDSTSYSPPPPQPLHQTPFPHFNADTLPSFSTARARSKPRLVKLRKQSAKSRTITAASGFNPFCTDQVTVNAVSDDSSCKFGDTGFVFSASVSGRDLNCEQKEASKIEKEMEIRNSGDVEFVFSAKGSEVESNPRKNEARIVSGEGEFNSKGFVFNSKGNNLVSNSNSEKGKSSEVECERPKCFDFVFSDNRCGKASNFNVEKQESLGAIRKSDSVTRKNEDAHQNGHLGNVDIDKGKSACGSSNCSSTAYSIFPSYKLTDEMKKLNINQSEGAGIDRGSTNPHVNSSAGFVFGGSEKGCGNFGVSSGTNSSRQESCTDATSENIGGKFFKECERNDVQNGTGCGITCSSAGIPCSKPSTRDECIRQFLFGKIPVSEESQLNGATEQFSSSSFGLDSIRNNYASTGHPFSEGHDKSNSCFTRTPDTSKESFMDFKPPTWDPSCFKDNLFPELSKKSELTKKGRSSKEKGSKHTRRKLKSHSLNKKPTSLDHLLKENSSLESPHCSGSHSPMDFSPYQETRADDLDVKASEELNDLHSKFSTDYKDEPFASANRAVDTNTTDQRHRDLDSGKLLSCNGSPCVGDFHSSVPELVWPSLKTKQFSISVVGASVDAGIDFSSNTEKHKADLFCFVHGPGDSKETDFAFSVSSTVHGTSSFKCKQKKKYRRGKGRNTFAISPNMNGKFESSVQFSPLTTVNMSSQSDGMNRPQTHDQFNEEGIAYSSAIHEACEKWRVRGNQAYKDGDLSEAEDFYTLGINSVPSSERSGCLIKPLLLCYSNRAATRMRLGRIREALGDCQLATAVDPTFQKAQMRIANCHLLLGEVENAQQCFKKCMESGSVVCLDRRVMVEAAEGLQKAQKVEKCINGAAELLKKMTSDAAGNALELLTTALSISSYSEKLLQMKAEALCLLQKYDEAIQVCERSQYLAEKNSVALLNSGNDSNISMCDSYSSVNLWRWSSISKCYFHLGKLESSLNVLEKLQQVVSVNDRCVIDYIEDSLSLAATIRELLDHKTAGNEKFKLGKYKEAVENYTVALSSNIKSRPFVAICFCNRAAAHQALGQITDAIADCSMAMAINAMYAKGRGDLITVVLQAISRRATLHEKVRDYEQAACDLRKLISVLETQSDDKTKPSDSPTGSNGVKESRKAHQRLLSVEDQAKKQIPLDFYLILGIKAADSASDIKKSYHKAALRHHPDKAGQLLPRSENGNEGHVWKEISQEVHKDADRLFKMIGEAYAVLSDPAKRADYDLEEETRKAYQSSRGGTCRRSSNFDGYGTPTGVYKSPSDKTSSGRYYGQQSQHQWKTHGHSYSSSRW 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1675 1329 Pfam DnaJ domain 1180 1263 IPR001623 -
Lal1g1675 1329 Gene3D Tetratricopeptide repeat domain 890 1006 IPR011990 GO:0005515
Lal1g1675 1329 Gene3D Tetratricopeptide repeat domain 737 889 IPR011990 GO:0005515
Lal1g1675 1329 SMART dnaj_3 1179 1258 IPR001623 -
Lal1g1675 1329 MobiDBLite consensus disorder prediction 471 506 - -
Lal1g1675 1329 MobiDBLite consensus disorder prediction 1 46 - -
Lal1g1675 1329 MobiDBLite consensus disorder prediction 1 21 - -
Lal1g1675 1329 MobiDBLite consensus disorder prediction 513 530 - -
Lal1g1675 1329 MobiDBLite consensus disorder prediction 481 498 - -
Lal1g1675 1329 ProSitePatterns Nt-dnaJ domain signature. 1243 1262 IPR018253 -
Lal1g1675 1329 SUPERFAMILY TPR-like 1026 1135 IPR011990 GO:0005515
Lal1g1675 1329 Gene3D DnaJ domain 1167 1282 IPR036869 -
Lal1g1675 1329 PRINTS DnaJ domain signature 1182 1200 IPR001623 -
Lal1g1675 1329 PRINTS DnaJ domain signature 1200 1215 IPR001623 -
Lal1g1675 1329 PRINTS DnaJ domain signature 1238 1258 IPR001623 -
Lal1g1675 1329 ProSiteProfiles dnaJ domain profile. 1180 1266 IPR001623 -
Lal1g1675 1329 SUPERFAMILY TPR-like 745 850 IPR011990 GO:0005515
Lal1g1675 1329 SUPERFAMILY TPR-like 826 998 IPR011990 GO:0005515
Lal1g1675 1329 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 1329 - -
Lal1g1675 1329 MobiDBLite consensus disorder prediction 1272 1329 - -
Lal1g1675 1329 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 1329 - -
Lal1g1675 1329 Gene3D Tetratricopeptide repeat domain 1022 1149 IPR011990 GO:0005515
Lal1g1675 1329 SMART tpr_5 788 821 IPR019734 GO:0005515
Lal1g1675 1329 SMART tpr_5 912 945 IPR019734 GO:0005515
Lal1g1675 1329 SMART tpr_5 1061 1094 IPR019734 GO:0005515
Lal1g1675 1329 SMART tpr_5 744 777 IPR019734 GO:0005515
Lal1g1675 1329 SMART tpr_5 969 1002 IPR019734 GO:0005515
Lal1g1675 1329 SMART tpr_5 1023 1056 IPR019734 GO:0005515
Lal1g1675 1329 SMART tpr_5 1106 1139 IPR019734 GO:0005515
Lal1g1675 1329 SMART tpr_5 822 855 IPR019734 GO:0005515
Lal1g1675 1329 CDD DnaJ 1180 1255 IPR001623 -
Lal1g1675 1329 SUPERFAMILY Chaperone J-domain 1155 1262 IPR036869 -
Lal1g1675 1329 MobiDBLite consensus disorder prediction 513 532 - -
Lal1g1675 1329 MobiDBLite consensus disorder prediction 1273 1329 - -
Lal1g1675 1329 Pfam Tetratricopeptide repeat 824 850 IPR019734 GO:0005515
Lal1g1675 1329 MobiDBLite consensus disorder prediction 1138 1163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1675 Lal-Chr1 19182778 19191413 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1675 K09527 - gmx:100809278 1371.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1359 11 17140834 17149228 Lal1g1675 1 19182778 19191413 LSH