Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1359 ATGTCGACGCCGGCGGTAAACCTCCGATCTCCGATCAACAGCTCCTCCGTCGATTCCACCTCTCACCTTCCTCCTCTTCCTCACCACGCTCCCTTTCCTCATTTCATCGCCGATACCTTAACCTCTTCCGCCACCGCCGCTTCCACCGCACGCACGAGATCAAAACCCCGCCTCACCAAGCTCAGGAAGCATTCCGCGAAGTCCAGGACCAGAACCACCGCCTCCGGCTTCAATCCTTTTTTCTCCGATCAGGTAACCGTTAGTGATGATATTTCTCGCAAGTTTGGGGACACAGGTTTTGTGTTCTCCGCTTCTGTTCCTGCTAGGGATTTGAATCATGATAAGGAAGAAGCTTCAAAAATTGATAAAGAAACGGAAACTAGTAAGTGTGATAGTGTGGAATTTGTGTTTATTGCTAAACCGAGTGTTAAGGAATCGAATTCACGTGAAAATGAAGCGATAACAGTTTCTGGTGAGGGGGAGGTTAGCATTAAGGGTTTTGTTTTTAATGCTAATGGAAACAACTTGGTTTCGGAAAAGGCAAAATCTAGTGAATGTGTTGAAAACCCAGTTGGGGAGAGTAAAAGTGGGGCTAATGTTGAGCGTGAAAATCTGAGTTGTTTTAATTTTGTTTTTGGTGACACTCATAGCGGTAAAGCGTCAAAGTTTAATTCGGAGAAGCAGAAGTCTGTTGGGGGTATGAGATATTCGGATCATGTAACTGGAACAAATACAGATGCTTATCAGAATGGTTATTTGGGTAATGATTATATTGATAAAGGTAAGAGTGCATGTGGAAGTAATCATGGTAATTCTACTGCCTATAGTGCCTTTCCTTCGTATAAATTAACTGATGAGATGAAGAAACTGAACATCGCCCGTTCTAAGGATTATACTAATAGAGATTCAACGAATGTGCATGTGAGTAGTAGCTTTGGATTTGTGTTTGGAGGAAGTGAGAAGGCTTGTGGCCATTTTAATGTTACTTCTGGAACTATATCTAATGACCAAGAGTCTCGCATTAATGTTGCTTCTGAGAATATTGGTGGGAAGCTTTTCAAAAAATGCGAAGTGAACAATGTCCAAAATGGAACTGGTTGTGGTATTGCAAATGATTCTATAGGAAACCCTTGGTCTAAGCCATCCAGTAGCAATGGAAAATTTCCAGTACCTGAAGTTTCACAAGTGAATGGAACTTCACCACCACTCTCCTCCTCCTCATTTGGTCTCAACTCCATTCAAAATAATTATGCTTCCACTGACCATCCCTTGAGTGAAGATCATAATAGACACAAAAATTGTTTTACAAGTACTCCAGATGCATCGAAGGAGTCTTTTATGGACTTTAAACCCCCAACATGGAGTCCTGATTGTTTTAAAGAGAATTTATTTCCCGAGTTGAATAGAAAATCAGAATCCACACAAAAGGGAAGATCTTGTAAAGAAAAAGGATCAAAACATATGAGGAGAAAATCAAGGCCACATTCCCTGAATAAGAAGCCTACAAGGCTGGATCAATTGTCAAAGGAAAACAGTTCCCTTCAATCCCCTGATTGTTCCGGTAGCTACTCGCCCATGGATTTTTCTCCCTATCAAGAAACAGGAGCTGATGATCAAGATGTAAAAGCTTCAGTGGAACTAAATGATCTGCACTCTAAGTTTCCCACTGGTTGTAAAAATGACCACTTAGCTGCTGCAAATAGAGGAGTTGGTACTTATATGACTGATCAAAGATGTGGAGATCCAGAAAATGACAAGTTATTGTCACGCAACGGAAGTTCTTCCATCGGTGGTTCTCATTCTTCTGGCCCTGAAATAGTCCGGCCTAGTTTGAAAACACACCAGTTCAGCAGTAGTAGTATGGCTGGTGCATCTGCAGATGCCGGGATTGACTTTAGCTCAAACACTGAAAAACAGAAACCTGATTGTTTTGTTCATCGGCTGGGTGATTCAAAGGAGATAGATTTTGCATTTTCTGCATCAATTGCAGAGGATGCTTCTTCGCTTAAGGGTAAACAGAAGAAATATAGAAGGAGAAAGGGCCATGACTCATTTGTTATCTCTCCAAATATGAATGGGAAGTTTGAATCTTCTGTTCAATTTTCACCACTTACTCCTGCCAGCATATCATCGCAATGTGATGGGATGGATAGATCTCGAATGAATGACCAGATCAAGGAAGGAGGTATTGCATACACATCTACATTTCATGAAGCTTGCGACAAGTGGAGACTCAGGGGAAACCAAGCATACAAGGACGGGTCTCTTTCTGAAGCTGAGGACTTCTACACACTAGGAATAAATTCTGTCCCCTCAAGTGAAAGATCCGGATGTTTGATTAAGCCTCTTCTACTATGCTATAGCAACCGTGCAGCCACATGCATGAGACTTGGAAGGATTAGAGAAGCTCTGGGGGATTGTGGGTTGGCTATTGCTCTGGACCCCACCTTTCAGAAAGCACAGATGAGAAATGCTAACTGCCACCTTTTGCTAGGAGAAGTAGAAAATGCTCAGCAGTGTTTTAATAAGTGCATGGAATCAGGTAGTGTTGTTTGTTTGGATCGGAGAGTCATAGTAGAAGCAGCTGAAGGGTTGCATAAGGCTCAGAAAGTGGTTGAGTGTATAAGTAGTGCTGCTGAACTTTTGAAGAAGAGGACTTCTGATGCAGCTGGTACTGCTTTGGAACTACTTACAACGGCATTTTCAATAAGTCCATACTCAGAAAAATTGCTTCAAATGAAAGCAGAGGCTCTATGTTCGCTGCAGAAGTATGATGCAACAATTCAGCTCTGTGAACGTAGCCAGCATCTTGCAGAGAAGAATTTTGTTGCCTTGCCAAACAGTGTTAACAGTTCCAATATTTCCATGTGTGATAATTACTCATCTGTAAACTTGTGGAGGTGGTCATTGATATCTAAGTGTTACTTTCATCTTGGAAAGCTTGAGGCATCACTTAAGGTTCTTGAGAAATTACAGCAACTTGTGCCTGTCAATGACAGATGTGTGGTTGATAACATTGAAGACTCACTGTCATTAGCTGCTACAATAAAAGAACTTCTACACTACAAGAATGCAGGAAATGAGAACTTTAAATTGGGAAAGTATAAAGAAGCAGTGGAGAATTACACTGTTGCCTTATCTAGCAATATCAAATCACGCCCTTTTGCAGCAATATGTTTCTGCAACCGTGCTGCTGCTCATCAAGCATTGGGCCAAATTGCTGATGCCATTGCAGACTGCAGTATGGCTATGGCCATCAGTAGAAATTATGCCAAGGCAATTTCTAGAAGAGCCACCTTACATGAAAAGGTTAGAGACTATGAGCAAGCTGCTTGTGACCTAAGAAAACTTATATCTGTTTTTGAATCTCAATCCGATGAAAAGACCAAACCATCTGACTCACCTAGTGGATCAAATGGCGTGAAAGAATCAAGGCAAGCTCATCAACATCTGCTTTCCGTGGAAGATCTAGCCAAGAAGAAAACCCCCTTGAACTTTTACCTCATCCTAGGAACTAAACCAGCTGACACAGCATCTGATATCAAGAAGGCATATCACAAGGCAGCTCTCAGACATCACCCAGACAAGGCCTGTCAGTGGCTGCCAAGAAGTGAAGTTGGAGATGAAGTTAAAGTCTGGAAGGAAATTTCACAGGAGGTGCACAAGGATTCTGATAGGCTTTTCAAAATGATTGGAGAGGCATATGCTGTGCTTTCTGACCCTTCCAAGCGCTCAGAGTATGATCTGGAAGAGGAGATAAAGAAAGCTTCTCAAAGTAGCCAAGGTGGCACATGCAGGAGATCTTCAGATTTTCATAGGTATGGAAGAGCATCTGATGGTTATAAATCTCCCTCCGACAAAACTTCTAGCAGACGAGATCAATGA 3885 0.4203 MSTPAVNLRSPINSSSVDSTSHLPPLPHHAPFPHFIADTLTSSATAASTARTRSKPRLTKLRKHSAKSRTRTTASGFNPFFSDQVTVSDDISRKFGDTGFVFSASVPARDLNHDKEEASKIDKETETSKCDSVEFVFIAKPSVKESNSRENEAITVSGEGEVSIKGFVFNANGNNLVSEKAKSSECVENPVGESKSGANVERENLSCFNFVFGDTHSGKASKFNSEKQKSVGGMRYSDHVTGTNTDAYQNGYLGNDYIDKGKSACGSNHGNSTAYSAFPSYKLTDEMKKLNIARSKDYTNRDSTNVHVSSSFGFVFGGSEKACGHFNVTSGTISNDQESRINVASENIGGKLFKKCEVNNVQNGTGCGIANDSIGNPWSKPSSSNGKFPVPEVSQVNGTSPPLSSSSFGLNSIQNNYASTDHPLSEDHNRHKNCFTSTPDASKESFMDFKPPTWSPDCFKENLFPELNRKSESTQKGRSCKEKGSKHMRRKSRPHSLNKKPTRLDQLSKENSSLQSPDCSGSYSPMDFSPYQETGADDQDVKASVELNDLHSKFPTGCKNDHLAAANRGVGTYMTDQRCGDPENDKLLSRNGSSSIGGSHSSGPEIVRPSLKTHQFSSSSMAGASADAGIDFSSNTEKQKPDCFVHRLGDSKEIDFAFSASIAEDASSLKGKQKKYRRRKGHDSFVISPNMNGKFESSVQFSPLTPASISSQCDGMDRSRMNDQIKEGGIAYTSTFHEACDKWRLRGNQAYKDGSLSEAEDFYTLGINSVPSSERSGCLIKPLLLCYSNRAATCMRLGRIREALGDCGLAIALDPTFQKAQMRNANCHLLLGEVENAQQCFNKCMESGSVVCLDRRVIVEAAEGLHKAQKVVECISSAAELLKKRTSDAAGTALELLTTAFSISPYSEKLLQMKAEALCSLQKYDATIQLCERSQHLAEKNFVALPNSVNSSNISMCDNYSSVNLWRWSLISKCYFHLGKLEASLKVLEKLQQLVPVNDRCVVDNIEDSLSLAATIKELLHYKNAGNENFKLGKYKEAVENYTVALSSNIKSRPFAAICFCNRAAAHQALGQIADAIADCSMAMAISRNYAKAISRRATLHEKVRDYEQAACDLRKLISVFESQSDEKTKPSDSPSGSNGVKESRQAHQHLLSVEDLAKKKTPLNFYLILGTKPADTASDIKKAYHKAALRHHPDKACQWLPRSEVGDEVKVWKEISQEVHKDSDRLFKMIGEAYAVLSDPSKRSEYDLEEEIKKASQSSQGGTCRRSSDFHRYGRASDGYKSPSDKTSSRRDQ 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1359 1294 MobiDBLite consensus disorder prediction 1269 1294 - -
Lal11g1359 1294 ProSitePatterns Nt-dnaJ domain signature. 1228 1247 IPR018253 -
Lal11g1359 1294 MobiDBLite consensus disorder prediction 1130 1146 - -
Lal11g1359 1294 MobiDBLite consensus disorder prediction 417 442 - -
Lal11g1359 1294 MobiDBLite consensus disorder prediction 1124 1146 - -
Lal11g1359 1294 SUPERFAMILY TPR-like 1019 1121 IPR011990 GO:0005515
Lal11g1359 1294 SUPERFAMILY Chaperone J-domain 1162 1253 IPR036869 -
Lal11g1359 1294 SUPERFAMILY TPR-like 741 995 IPR011990 GO:0005515
Lal11g1359 1294 MobiDBLite consensus disorder prediction 507 529 - -
Lal11g1359 1294 MobiDBLite consensus disorder prediction 1 28 - -
Lal11g1359 1294 Gene3D Tetratricopeptide repeat domain 738 853 IPR011990 GO:0005515
Lal11g1359 1294 Gene3D Tetratricopeptide repeat domain 1019 1134 IPR011990 GO:0005515
Lal11g1359 1294 MobiDBLite consensus disorder prediction 587 607 - -
Lal11g1359 1294 Pfam DnaJ domain 1165 1248 IPR001623 -
Lal11g1359 1294 Gene3D DnaJ domain 1153 1269 IPR036869 -
Lal11g1359 1294 Gene3D Tetratricopeptide repeat domain 866 1018 IPR011990 GO:0005515
Lal11g1359 1294 MobiDBLite consensus disorder prediction 581 607 - -
Lal11g1359 1294 MobiDBLite consensus disorder prediction 482 497 - -
Lal11g1359 1294 MobiDBLite consensus disorder prediction 55 69 - -
Lal11g1359 1294 MobiDBLite consensus disorder prediction 1 22 - -
Lal11g1359 1294 PRINTS DnaJ domain signature 1167 1185 IPR001623 -
Lal11g1359 1294 PRINTS DnaJ domain signature 1185 1200 IPR001623 -
Lal11g1359 1294 PRINTS DnaJ domain signature 1223 1243 IPR001623 -
Lal11g1359 1294 SMART tpr_5 1057 1090 IPR019734 GO:0005515
Lal11g1359 1294 SMART tpr_5 1091 1124 IPR019734 GO:0005515
Lal11g1359 1294 SMART tpr_5 965 998 IPR019734 GO:0005515
Lal11g1359 1294 SMART tpr_5 1019 1052 IPR019734 GO:0005515
Lal11g1359 1294 SMART tpr_5 908 941 IPR019734 GO:0005515
Lal11g1359 1294 SMART tpr_5 818 851 IPR019734 GO:0005515
Lal11g1359 1294 SMART tpr_5 740 773 IPR019734 GO:0005515
Lal11g1359 1294 SMART tpr_5 784 817 IPR019734 GO:0005515
Lal11g1359 1294 MobiDBLite consensus disorder prediction 469 538 - -
Lal11g1359 1294 MobiDBLite consensus disorder prediction 44 74 - -
Lal11g1359 1294 MobiDBLite consensus disorder prediction 1249 1294 - -
Lal11g1359 1294 CDD DnaJ 1165 1240 IPR001623 -
Lal11g1359 1294 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 1277 - -
Lal11g1359 1294 ProSiteProfiles dnaJ domain profile. 1165 1251 IPR001623 -
Lal11g1359 1294 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 1277 - -
Lal11g1359 1294 SMART dnaj_3 1164 1243 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1359 Lal-Chr11 17140834 17149228 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1359 K09527 - gmx:100809278 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1359 11 17140834 17149228 Lal1g1675 1 19182778 19191413 LSH