Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1649 ATGATGTCCACTTTCCTCTCTCAGTTTCAAACTATCAAGAACACCCTCAATCACCTTGTTATTGCAGTGGAGGATGTAAATGATTTGTGGCCAACTGTGAAGAATGCTTTTGAGGCGAGATTGCCATTCAAAATGGCATCTTTGAATAACAAGGCACGAAACTCTGTTTTTGTTGAGAAATTGCCAGCTGAGTTCATATTAACTACAGATTCAAGACTCCGAAGTCGGTTCCCGCAGGAGCAGTTGTTGTTTTGGTTTCGAGAGCCGTATGCAACTGTTGTACTTGTTACATGTGAGGATCTTGACGAGTTCAAAACCATCCTTAAACCTCGCCTGAAATTAATTGTCCAAAATGATGAGAGGGAATGGTTTATTGTGTTTGTATCTAAAGCTCAAGCAGCTAATGATCAGGCGAAAAAAATGGCAAAGAAAGTATATGCTAAAATTGAAGTTGAATTTAGCTCCAAAAAAAGAGAAAGATGTTGCAAATATGATATGCATTTCCCTGAAGCAAACTTTTGGGATGATATGGAATCTAAGATAATGGAATGCATCAGAATTACACTGGATAGACGTGTACAATTTTATGAGGACGAGATACGAAAGCTCAGTGAACAGCGTCTCATGCCAGTGTGGAACTTCTGTAATTTTTTCATTCTGAAGGTTAATCCTTTTCTTATGAGTCAGAGACTTAAGATTGCAATAAATAGTTCTTCTAACCCAATCTTTGTTGATTTTCTCCTTCGGTCATTCATGGAGATTATGGCTTCTTTTAATAAATTTGTATTCTGTGCTCAGGAAAGCTTGGCATTTATGTTTGAAATGGCTCACCTCCATGAAGATGCAATGCGGGAATATGATGAACTAGAACTCTGCTATCTTGAGACAGTTAACATGACTGGAAAGCAAAGGGACTTTGGAGGTGCAGACCATGGTGATGATCAGGCAGCATTGCTTAATCCAGGAAAAAAAGCATTGACGCAGATGGTTCAAGAGGACTCGTTTAGGGGGTTTGAATTTAGACAATATCTATTTGCCTGTACCTCAAAGCTCTTATTCAAGCTGAATCGTCCCTTTGAGGTTGCATCACGGGGTTATTCTTTCATAATAAGCTTTTCCAAATCTTTGGCATCACGCGAGCATATTCTGCCTTTTTGTATGCGTGAAGTCTGGGTGATAACTGCATGCTTAGCTTTAATTGAAGCAACAATTTCTCATTATGATGAAGGACATGTGGTGCCTGACATGGAGCAGGAGTTCTTTCGTCTTCTGGGTGACCTTTATTCACTTGCTAGAGTTAAGTTCATGAGAATTGCGTATCTAGTTGGGTATGGAACTGATATAGAAAGAAGTCCTCTCAACAGTGCATCTCTCAGCTTACTTCCTTGGTCTAAGCCAGCAGTTTGGCCTTCAGTTCCTGCCGATGCATCAGTAGAGGTGCTTGAGAAAGAGAAGCTGATTCTCCAGACAAATCCTAGAGCCAAGCACTTCGGTATCCAGAGGAAACCCCTGCCTCTTGAACCTACCATGCTTCTACGAGAGGCCAACAGGCGAAGGGCTTCACTTTCAGCTGGAAATGTGTTTGAAATGCTTGATAGTCGTCAGGCTGCATTGGAAGGATCACCATCACAAAAACTACATGTAAGTTCCATGCTGCGTGCTAATTCTTCACCAGAAAGCATCAATAGCTCAATTGACCAACCTATGAGGCCTGCTGAGATTTATATAGCCGCTGAGCATGCTTTGAGGCAAACCATTTCTAATCCAGCACTGTTGAAATCATTATCGTCATCTGAGGAGTTTGAGCAAAAATATTTTGAGCTAACTAAAGGTGCTGCTGACAATTACCATCGTTCCTGGTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGATAGCAGCAGTCGCCTTTAAGCATGGACATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCACTTTATGCTGGTGAAGGATGGCAAGACTTGTTGGCTGAGGTCCTTCCCAATTTAGCTGAGTGTCAGAAGATACTCAATGATCAGGCTGGCTACTTACTGTCCTGTGTGAGGTTACTTTCTCTTGATGAAGAACTATTTTTGACGAAGGAGCGTCAAGCTTTTCAGTCAGAAGTTCTTCGTCTTGCTCATAGTGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAATTACGTTTTCTGGCAACCCTGGGCCTCTGATGGAGTTGTGTGATAGGGATCCTGGTTCCCTTCCTGTAACTGTTTGGAGCGGTTTCCCAGATGATATAACTCTTGATTCAATCAGTCTTACATTAACATCAACACACAATGCTGACGAAGGTGTAAAGGCGTTGAAGAGTTCTACAGCTACCATCTTACATCCTGGTCGGAATACTATTACCTTGGATCTACCACCTCAGAAACCAGGGTCATATGTGCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGAGATTTAGATCTCATAGTTTTTCAAAAGGTGGTCCTGAAGATAGTGATGATTTTATGAGTTATGAAAGGCCAGCTAAACCTATTCTGAAGGTCGCCAAACCTAGAGCCCTCGTTGATCTTGAAGCTGCTGTTTCATCTTCCTTGTTAATAAATGAACATCAATGGGTTGGCATTTTAGTTCGACCCATTAATTACTCTCTCAAAGCTGCTGTCTTGCATATAGATACTGGTCCGGGATTAGAGATTGAAGATTCACATGTAATTGAGATGGAAAGTTCTTCCAGTGTATTACAGAGTGACAATGAGCAGTTGCAGGAGGATGGTGCTCAAATAGTATCTTTGAATTCTGGAAAAAGGTTTGAACGTTTGTCTCTCTGTGATGGTAAAATAGAGTTTCCAACTTGGGCAAGTGACACACCTTCTACTCTTTGGGTTCTGATTCGTGCCATCGGTGACTCGCTCAGCAGAGGATCATCTTCAGCCACCACTAGGACCGAGAATATTGTAGATGGAATGAGAACAATAGCTCTGAAACTTGAATTTGGAGTATTCCACAATCAGATATTTGAAAGGACCCTTCCAGTGCATTTTACATATCCTTTCTATGTTACGACCCGTGTTACCGATAAATGGTATGATGGTACCCTGCTTCTGCAGGTTATACTTCACTCTGAAGTAAAGGCTAAATTGACCATATATGATGCCTGCCTCGATCTTCAAGATGGTTTTGTTCATAATGGAGAAAGTGAGGGTAGACCTAATTCTATTGACTTCCCACTGGTCATATCTCCCACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTAGGCACGGCAAATGAAGAAGAAGCCACAAAGCTATCAGAAAGCATATTAAATATCAGATATGGAATTTCTGGCGATAGAACAATTGGAGCCCATCCTCCTGTCATGAATGAATCTACTGGAGTTGATAGTGCCAGACAAGAGTTGATCTTCAGGACCACAATTGCTTTGCAAAGGCCTGTGCTTGATCCATGCCTAGCTGTTGGTTTTCTTCCTCTCCCTTCGGATGGCCTAAGAGTTGGGAAACTAGTAAAGATGCAATGGCGGGTAGAAAGGTTAAAGGATTTGGATAAAAAAGAAGTCTCTGAACATAATGATGAGGTGCTATATGAGGTAAATGCTTATTCTGGAACTTGGATGATAGCTGGGAGGAAAAGAGGACATGTATCTCTCTCCAGTGAAGAAGGTGCAAGGATCGTTATCTCAATTTTATGCATGCCACTGGTGGCTGGTTATGTGCGGCCACCAATACTTGGGCTGCCGGATGTTGATGACGCAGATATAAGCTGCAAACCTGCTGGGCCACATCTTGTTTGTGTTTTGCCCCCAGCTCTCTGCTCATCCTACTGCATTCCAGTTGATTCACGAGCTTAG 3894 0.4194 MMSTFLSQFQTIKNTLNHLVIAVEDVNDLWPTVKNAFEARLPFKMASLNNKARNSVFVEKLPAEFILTTDSRLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDEREWFIVFVSKAQAANDQAKKMAKKVYAKIEVEFSSKKRERCCKYDMHFPEANFWDDMESKIMECIRITLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKVNPFLMSQRLKIAINSSSNPIFVDFLLRSFMEIMASFNKFVFCAQESLAFMFEMAHLHEDAMREYDELELCYLETVNMTGKQRDFGGADHGDDQAALLNPGKKALTQMVQEDSFRGFEFRQYLFACTSKLLFKLNRPFEVASRGYSFIISFSKSLASREHILPFCMREVWVITACLALIEATISHYDEGHVVPDMEQEFFRLLGDLYSLARVKFMRIAYLVGYGTDIERSPLNSASLSLLPWSKPAVWPSVPADASVEVLEKEKLILQTNPRAKHFGIQRKPLPLEPTMLLREANRRRASLSAGNVFEMLDSRQAALEGSPSQKLHVSSMLRANSSPESINSSIDQPMRPAEIYIAAEHALRQTISNPALLKSLSSSEEFEQKYFELTKGAADNYHRSWWKRHGVVLDGEIAAVAFKHGHFDQAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYLLSCVRLLSLDEELFLTKERQAFQSEVLRLAHSEMKDPVPLDVSSLITFSGNPGPLMELCDRDPGSLPVTVWSGFPDDITLDSISLTLTSTHNADEGVKALKSSTATILHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKGGPEDSDDFMSYERPAKPILKVAKPRALVDLEAAVSSSLLINEHQWVGILVRPINYSLKAAVLHIDTGPGLEIEDSHVIEMESSSSVLQSDNEQLQEDGAQIVSLNSGKRFERLSLCDGKIEFPTWASDTPSTLWVLIRAIGDSLSRGSSSATTRTENIVDGMRTIALKLEFGVFHNQIFERTLPVHFTYPFYVTTRVTDKWYDGTLLLQVILHSEVKAKLTIYDACLDLQDGFVHNGESEGRPNSIDFPLVISPTSKAGILFSICLGTANEEEATKLSESILNIRYGISGDRTIGAHPPVMNESTGVDSARQELIFRTTIALQRPVLDPCLAVGFLPLPSDGLRVGKLVKMQWRVERLKDLDKKEVSEHNDEVLYEVNAYSGTWMIAGRKRGHVSLSSEEGARIVISILCMPLVAGYVRPPILGLPDVDDADISCKPAGPHLVCVLPPALCSSYCIPVDSRA 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1649 1297 PANTHER BNAC09G30770D PROTEIN 250 1293 - -
Lal1g1649 1297 PANTHER BNAC09G30770D PROTEIN 2 222 - -
Lal1g1649 1297 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 250 1293 IPR045126 GO:0048193|GO:1990071
Lal1g1649 1297 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 2 222 IPR045126 GO:0048193|GO:1990071
Lal1g1649 1297 Coils Coil 186 206 - -
Lal1g1649 1297 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1177 1254 IPR022233 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1649 Lal-Chr1 18908675 18922449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1649 K20307 - gmx:100787264 2085.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1649 1 18908675 18922449 Lal1g1649 1 18908675 18922449 ECH
Lal20g0311 20 2428664 2440902 Lal1g1649 1 18908675 18922449 LSH