Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1615 CCTAACGACAACGTTTCACTTAATCAGAAACCCATAGGTTCCGTTGTCGCCGCTTCCTTCCTCCGCCATCACCACCGGCGAACGTTTCGATCTTTACTAACCACAATGTCAAAGGGAACAAACTCAAAGTTAAACATCGCTATAATTCACCCTGATCTTGGCATAGGTGGAGCTGAAAGATTAATTGTGGATGCAGCTGTTGAGCTTGCATCACATGGTCATAAAGTTCATATTTTTACTGCACATCATGATAAGAATAGATGTTTTGAAGAAACTGTTGCTGTAACTTTCCAGTTACTGTATATGGCTCCTTTCTTCCTCGGCACATATTCTATCGACTCCATGCGTTGTGTGCATACCTTCGGTGCCTATCAGGTCTCTGTAGTTATTCCGATCGTGAAACTTAAAAGGTCAACAAAGGTTGTATTCTATTGTCATTTTCCAGACTTGTTACTGGCTCAACATTCAACATTCCTCTGGAGGATGTATAGGAAACCAATCGATTTTGTGGAAGAAATAAAAACTGGAATGGCTGATTTGATACTTGTTAACAGCAACTTCACTGCATCTACTTTTGCAAACACTTTTAAGCATCTCAATGCTAAAGGGATTCGACCCGCCACTCTATACCCCGCTGTGAACGTTGATCAGTTCAATGAACCTAGTTCTTTTAATATGAATTTTCTTTCCATTAATCGCTTTGAAAGGAAGAAGAACATTGAATTAGTAATTTCAGCTTTTGCTATGCTTCATTCACCTGAAGGGGTTCTCAAGCATCAAGATATCACTAATGCTTCTTTGACTGTTGCAGGTGGCTTTGATAAACGGTTGAAGGAGAACGTGGAATACTTAGAAGAGCTTAAAGATTTAGCGGAAAAGGAAGGAGTCTCTAACAAAATAAGATTCGTCGTATCGTGCTCTACAGCTGAAAGGAATGCTCTTCTCTCAGAATGCCTATGCGTCCTTTACACCCCGAAGGATGAACATTTTGGCATTGTTCCTTTGGAGGCAATGGCTGCTTATAAACCTGTTATTGCATGCAATAGTGGTGGCCCTGTGGATTCAATCAAGAATGGTGTAACAGGTTTCCTTTGCAATCCTACACCACAAGACTTTTCTTTAGCAATGACTAGATTCATTGAAGATCCACAATTTGCTGAAACAATGGGAAGAGAAGCTAGGAAGCATGTTGTTGAGTCATTTTCCACAAAGACATTTGGCCAGCATTTAAATAGATATATACTTGACATTCACAGGGGAAAGGAGGATTGA 1272 0.4025 PNDNVSLNQKPIGSVVAASFLRHHHRRTFRSLLTTMSKGTNSKLNIAIIHPDLGIGGAERLIVDAAVELASHGHKVHIFTAHHDKNRCFEETVAVTFQLLYMAPFFLGTYSIDSMRCVHTFGAYQVSVVIPIVKLKRSTKVVFYCHFPDLLLAQHSTFLWRMYRKPIDFVEEIKTGMADLILVNSNFTASTFANTFKHLNAKGIRPATLYPAVNVDQFNEPSSFNMNFLSINRFERKKNIELVISAFAMLHSPEGVLKHQDITNASLTVAGGFDKRLKENVEYLEELKDLAEKEGVSNKIRFVVSCSTAERNALLSECLCVLYTPKDEHFGIVPLEAMAAYKPVIACNSGGPVDSIKNGVTGFLCNPTPQDFSLAMTRFIEDPQFAETMGREARKHVVESFSTKTFGQHLNRYILDIHRGKED 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1615 423 Coils Coil 274 294 - -
Lal1g1615 423 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 41 420 IPR027054 GO:0004378|GO:0006486
Lal1g1615 423 Gene3D Glycogen Phosphorylase B; 41 207 - -
Lal1g1615 423 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 45 414 - -
Lal1g1615 423 Gene3D Glycogen Phosphorylase B; 214 402 - -
Lal1g1615 423 Pfam Glycosyltransferase Family 4 55 216 IPR028098 -
Lal1g1615 423 Pfam Glycosyl transferases group 1 228 395 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1615 Lal-Chr1 18562964 18577957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1615 36 423 Glycosyltransferase AT1G78800 68.215 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1615 K03843 - gmx:100809168 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1615 1 18562964 18577957 Lal1g1615 1 18562964 18577957 ECH
Lal20g0381 20 3041204 3044927 Lal1g1615 1 18562964 18577957 LSH