Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1612 ATGGGTTGTGTTGAATCTTCACAATCCAAGGCTGATGGGGCACTAAAAGCGATCCGAAAGCCTAAACCTTGGAAGCATCCTCAGCCAATAACAAGGAATCAGCTAATGCAACTGCGTGATGAGTTTTGGGACACAGCTCCTCACTATGGTGGCCGGAAAGAGATTTGGGACGCGCTTCGAGCTGCGGTCGAGGCTGATCTATCTTTAGCACAAGCAATTGTGGATAGTGCAGGGGTCATTGTCCAGAGTTCTGATATGACAGTATGCTATGATGAAAGAGGAGCAAAGTATGAGTTACCCAAGTATGTTTTGAGTGAGCCAACTAATCTGATTCGGGAAAATTAA 345 0.458 MGCVESSQSKADGALKAIRKPKPWKHPQPITRNQLMQLRDEFWDTAPHYGGRKEIWDALRAAVEADLSLAQAIVDSAGVIVQSSDMTVCYDERGAKYELPKYVLSEPTNLIREN 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1612 114 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 111 - -
Lal1g1612 114 Pfam Ubiquitin-binding domain 16 112 IPR032752 -
Lal1g1612 114 MobiDBLite consensus disorder prediction 1 31 - -
Lal1g1612 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 111 IPR039869 -
Lal1g1612 114 Gene3D - 31 104 IPR038169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1612 Lal-Chr1 18539473 18544912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1612 - - cit:102608330 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1612 1 18539473 18544912 Lal1g1612 1 18539473 18544912 ECH
Lal11g1473 11 17996363 17999933 Lal1g1612 1 18539473 18544912 LSH