Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1473 ATGGGTTGTGTTGGATCATCACAATCCAAGGTTGATGGGGCACTAAAAAAGATCCGGAAGCCTAAACCTTGGAAGCATCCTCAGCCAATAACGAAGACTCAACTTATGCAATTGCGTGATGAGTTTTGGGACACCTCTCCTCATTATGGTGGCCGGAAAGAGATTTGGGACGCGCTTCGAGCTGCTGCAGAAGCTGATGATATATCTTTAGCACAAGCAATTGTGGATAGTGCTGGGGTCATTGTGCAGAGTTCTGATTTGACAGTATGCTATGATGAAAGAGGAGCAAAGTATGAGCTACCTAAGTATGTTTTGAGTGAGCCAACTAACTTGATTGGGGACAAATAA 348 0.4425 MGCVGSSQSKVDGALKKIRKPKPWKHPQPITKTQLMQLRDEFWDTSPHYGGRKEIWDALRAAAEADDISLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIGDK 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1473 115 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 112 IPR039869 -
Lal11g1473 115 Gene3D - 31 105 IPR038169 -
Lal11g1473 115 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 112 - -
Lal11g1473 115 Pfam Ubiquitin-binding domain 16 113 IPR032752 -
Lal11g1473 115 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1473 Lal-Chr11 17996363 17999933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1473 - - gmx:100306399 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1473 11 17996363 17999933 Lal11g1473 11 17996363 17999933 ECH
Lal11g1473 11 17996363 17999933 Lal1g1612 1 18539473 18544912 LSH