Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1592 ATGTCTCTGTTTGCTGCATATTCTATATGTAAAGTTGCCAAGGATGCAGCTGGAATAGCTGGGAACATCTTTGCTTTTGGGTTATTTGTATCTCCCATACCCACATTTAGAAGAGTTATCAGAAATGGGTCAACAGAAATGTTCTCAGGGTTACCATATATTTATTCTCTCATCAACTGTTTGATTTGCATGTGGTATGGCACACCTCTGATATCATCTGATAATTTGTTGGTTACAACTGTTAATTCAATTGGAGCAGTGTTTCAGTTTGTGTACATAGTCATCTTCATGATGTATGCTGAGAAAACAAAAAAGATGAGAATGTTAGGATTGTTGCTGGCAGTTCTTGGCATATTTGCAATTGTATTAGTTGGGAGTCTGCAAATTAGTGACAATGTAACGCGCCGACTCTTTGTGGGATCGTTGAGTTGTGCTTCTCTCATTTCGATGTTTGCTTCTCCGTTGTTTATAATTGGTCCAAATGGGATAGGAACCATTTTGGGAATAGTACAGTTGATTTTATACTTCTATTACGAAAATAAATCTAGAGAAGACTCGAGAGAACACTTGGTAGTGTCATACGCATGA 588 0.3759 MSLFAAYSICKVAKDAAGIAGNIFAFGLFVSPIPTFRRVIRNGSTEMFSGLPYIYSLINCLICMWYGTPLISSDNLLVTTVNSIGAVFQFVYIVIFMMYAEKTKKMRMLGLLLAVLGIFAIVLVGSLQISDNVTRRLFVGSLSCASLISMFASPLFIIGPNGIGTILGIVQLILYFYYENKSREDSREHLVVSYA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1592 195 PANTHER RAG1-ACTIVATING PROTEIN 1 9 158 - -
Lal1g1592 195 PANTHER RAG1-ACTIVATING PROTEIN 1 156 195 - -
Lal1g1592 195 Gene3D - 11 104 - -
Lal1g1592 195 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET2 9 158 - -
Lal1g1592 195 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET2 156 195 - -
Lal1g1592 195 Gene3D - 105 191 - -
Lal1g1592 195 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1592 Lal-Chr1 18289451 18292890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1592 1 194 Miscellaneous Gene Families AT3G14770 52.340 4.31e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1592 K15382 - gmx:100776187 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1592 1 18289451 18292890 Lal1g1592 1 18289451 18292890 ECH
Lal20g0399 20 3205374 3208443 Lal1g1592 1 18289451 18292890 LSH