Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1382 ATGTCAGAAACAACTCCATCTGAATCATCACCTTCAACCATTCAAAATCAAAATCAAAATCCACAACCATCATCATCATCAATTTCAATCTCTCAACAACAACAACAACAAATTCTGAATCCATCACCTTCCACCTTCGATTACCAACAACAACAACAACAAAAATCAATTCAACAACAACAACAACAATCGCAAACCCTAAATCAGCTACACTCGAATTTTCAATTACAGCAAACCCTACAACGATCCCCTTCAATGTCGCGCCTCAATCAACAACTTCAGACTCAGCAACAGCAACAACAACAGCAGCAACAATTCGGCGCTGTCATGAGGCAACAATCTGGTTTATATAACAATCAGATGAGTTTCAACGGTTCTAGTTCACCTCAGTTGCAGAATCAGCAGCAGCAGCAGCAGTTGGGAGGATCGAATTTGTCGCGGATCGGGCAAAGTGGACAGTTTCCTATGTTGTCTGGTGCTGGGACACAGTTTAATTTGTTGCCATCGCCAAGGCAGAAGGGTGGACTGGCCCAGGGGTCTCAATTCTCTTCGAGTAATTCTGCTGGACAGCCACTGCAAGGAATGCAAGCAATGGGGATGATGGGGTCGCCAAATATCAGTTCACAGCTAAGAGCCACTGGAGCCCTTGCTTATGCTCAGCAGATGCGGATGAGCCAGGGTCAAATCAGGCAACAGCTATCACAACAAAACTCGCTTAACACTCCACAGGTTCAAGGCTTACCAAGGTCATCATCCCTTGCTTTTATGAATTCCCAGTTATCTGGGTTGTCTCAGAATGGACAGCCTGCAATGATTCATAATTCTTTAACACAGCAACAGTGGTTTAAACAAATGCCAGCTATGTCTAGCCCAGCCTCACCATTGCGTCTTCAACAACACCAGAGGCAGCAGCAGCAGCTGGCGTCGCCTACTCAACTGCAACAAAACTCTATGACCCTGAACCAACAGCAATTATCCCAGCTTATGCAGCAATCGAAACCAATAGGGCAGCCTCAGCTGCATCAGCAACAACAGCCCCAGCAGCAGCAACATATACAACAGCAGCCACAGCAACAATCTCAACTACAGGCAACTGTTCATCAACAGCAACAGCAGCATTCTCCTAGGATTCCAGGACCCACAGGCCAAAAATCAGTTAGTTTTACAGGGTCACAGCCTGATGCAACTGCATCTGGGGCAACTACACCAGGGGGAAGTTCAAGCCAAGGAACTGAAGCAACAAACCAACTCCTTGGGAAGAGAAAGATACAGGATTTAGTTTCACAGGTGGATCCACAGGGTAAGCTGGACCCTGAAGTTATAGATATGCTTTTGGAGCTTGCTGATGACTTCATTGATTCTGCGACCGCACATAGTTGCATTTTCGCGAAGCATAGAAAATCATCAACTTTGGAGTCCAAAGATTTATTGCTACACCTAGAGAAAAATTGGGATTTAACAATTCCCGGATATTCAAGTGAAGAGAAGTATGATAAAAAACCTCTATCAAATGACTTACACAAGAGGCGCCTAGATATGGTTCAGACATTGATGGAATCCTCAAACTCAGAGTCAAGTATGAACAATTCTAAAGAGATGAGTAGACAGGGTCTTCAGAATCCTGTTGGTGCCCATCACTTGATAAGACCCTTAAGTTCAGAGCAGTTAGTTTCTCATTCAAGTGACTCTCAAATGCTACCTCAGATGACAAGGTTTTAA 1719 0.4444 MSETTPSESSPSTIQNQNQNPQPSSSSISISQQQQQQILNPSPSTFDYQQQQQQKSIQQQQQQSQTLNQLHSNFQLQQTLQRSPSMSRLNQQLQTQQQQQQQQQQFGAVMRQQSGLYNNQMSFNGSSSPQLQNQQQQQQLGGSNLSRIGQSGQFPMLSGAGTQFNLLPSPRQKGGLAQGSQFSSSNSAGQPLQGMQAMGMMGSPNISSQLRATGALAYAQQMRMSQGQIRQQLSQQNSLNTPQVQGLPRSSSLAFMNSQLSGLSQNGQPAMIHNSLTQQQWFKQMPAMSSPASPLRLQQHQRQQQQLASPTQLQQNSMTLNQQQLSQLMQQSKPIGQPQLHQQQQPQQQQHIQQQPQQQSQLQATVHQQQQQHSPRIPGPTGQKSVSFTGSQPDATASGATTPGGSSSQGTEATNQLLGKRKIQDLVSQVDPQGKLDPEVIDMLLELADDFIDSATAHSCIFAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKYDKKPLSNDLHKRRLDMVQTLMESSNSESSMNNSKEMSRQGLQNPVGAHHLIRPLSSEQLVSHSSDSQMLPQMTRF 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1382 572 Pfam Transcription initiation factor TFIID subunit A 419 486 IPR003228 GO:0005669|GO:0006352
Lal1g1382 572 MobiDBLite consensus disorder prediction 285 313 - -
Lal1g1382 572 MobiDBLite consensus disorder prediction 327 412 - -
Lal1g1382 572 SUPERFAMILY Histone-fold 416 487 IPR009072 GO:0046982
Lal1g1382 572 MobiDBLite consensus disorder prediction 82 152 - -
Lal1g1382 572 MobiDBLite consensus disorder prediction 228 247 - -
Lal1g1382 572 CDD TAF12 418 486 IPR003228 GO:0005669|GO:0006352
Lal1g1382 572 MobiDBLite consensus disorder prediction 1 65 - -
Lal1g1382 572 Gene3D Histone, subunit A 413 488 IPR009072 GO:0046982
Lal1g1382 572 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 7 571 - -
Lal1g1382 572 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 7 571 IPR037794 GO:0000124|GO:0005669|GO:0046695
Lal1g1382 572 MobiDBLite consensus disorder prediction 167 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1382 Lal-Chr1 15861938 15869695 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1382 K03126 - gmx:100783017 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1382 1 15861938 15869695 Lal1g1382 1 15861938 15869695 ECH
Lal1g1382 1 15861938 15869695 Lal18g0124 18 978489 984467 LSH