Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0124 ATGAATCAATTATCAATGGCGGAAACAACAACTGCAAGCACAACACAATCTGCATCATCATCATCATCATCATCACTCCTTCAATCCTCAATCATTGATAATCAAAATCTCAATCCACAACCAAACCCTTCATCATCAATTTCAATCTCTCAACAACACTTGATCCCTTCATCTTCAACTTTAGATTATCAACAACACAAATCAATGCAACAATCACAAACTCTTAATCAACTTCACTCAACTTTTCAGTTGCAGCAAACCCTACAGCGATCACCTTCCATGTCGCGACTCAACCAACTCAACACTCAGAGCCAGCAATTCGCCGGTGTCATGAGGCAGCAGACCGGTTTATATGGCAGCCAGATGAATTTTGGTGGTTCTGCTTCGGCTCAGTTGCAGAATCAGCAGTTGGGAGGGTTGAATTTGTCGCGGTCCACGATGATAGGGCAAACTGGACACTTTCCTACGTTGTCTGGTGCTGGATCACAGTTTAACTTGTTGTCATCGCCAAGGCAGACGGGTGGACTAGTCCAGGGTTCTCAATTCTCTTCCAGTAATTCTGCTGGGCAGCCACTGCAAGGAATGCAGACATTGGGGATGATGGGGTCCCCAAATCTCAATTCACAACTAAGAGCCAGTGGAGCCCTTGCTTATGCTCAGCAGCTGCGGATGAACCAGGGCCAAATCAGGCAACAACTAGCGCAACAAAATTCGCGTAACACTCCACAGGCAGAGGTTGGACACTCTGCAATTCTGTGGTACGTCCTTTTACCTCAACCAACCGGATGGGTGCGAATTGTGTTCATGTATGCGATGGGTACTTACCCAGTAGGCCGGGTCCACGCAACCCAGTTCTGGAATTTTGTTTCGTCAGTATTAAATACTGAAACTTCCCCCAACATTCACATTTTGGCACATCCCATTCCCATACCATCTATGTTGGCTTTTGTGACTTGTCTATGGCTGCGGATTTTGTCTTTTGTGGTTCAAGGCTTACAGAGGTCGACATCCCTTGCTTTCATGAATTCCCAGTTATCTGGGTTGTCGCAGAATGGACAGCCAGCAATGATTCATAACTCTTTAACACAGCAACAGTGGCTTAAGCAAATGCCAGCAATGTCTGGCCCTTCCTCACCACTGCGTCTCCAACAACACCAGAGGCAGCAACAGCTGGCTTCATCTAATCAACTACAACAAAACTCTATGGCTCTGAACCCACAGCAATTGTCCCAGCTGATACAGCAACAGAAACCAATGGGGCAGCCTCAGCTGCTCCAACAGCAGCAGCCCCAGCCCCAGCAACAGCCCCAGCCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTCCAGCCACAGCAGCAGCAGCAGCCGCTCCAGCAGCAGCAGCAGCCGCTCCAGCAGCAGCAGCAGCCGCTCCAGCAGCAGCAGCAGCCGCTCCAGCAGCAGCAGCAGCAGCTCCAGCCACAGCAGCAGCAGCTCAATCCACAGCAGCAGCTGCTCCAGCAACAGCAACAACAACTTAGACAACAGCAGCCACAACAACAACAATCTCAACTACAAGCAATTGTTCATCAACAGCAACAGCAGTATTCTCCAAGGATTCCAGGACCTACAGGCCAAAAGTCACTTAGTTTAACAGGGTCACAGCCTGATGCCACTGCATCTGGCGCAACTACACCAGGGGGAAGTTCAAGCCAAGGAACAGAAGCAACAAACCAACTCCTTGGAAAGAGAAAGATACAGGATTTAGTTTCGCAGGTGAATCCACAGGCTAAGCTGGACCCTGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTTATTGATTCTGCGACTACACATAGTTGCATTTTGGCGAAACATAGAAAATCTTCAACTCTGGAGTCCAAGGATTTATTGCTACACCTAGAGAAAGATTTGGATTTAACAATTCCAGGATATTCAAGGGAGGAGAAGTATCATAACAAACATCTATCAAATGACCTACACAAAAGGCGCCAAGATATGGTTCACACATTGATGGAATCCTCAAACTCTGAGACAAGTATGAACAACACAAAAGAGATGAGTAGACAGGGTCTTCATAATCCTGTGGGTGCCCAACAATTAGTAAGAGCTCTAAGTTCAGAGCAATTGGTTCCTCATTCAACTGGCTCTCAAATGCTACCTCAGATGACTAGGTTTTAA 2199 0.4743 MNQLSMAETTTASTTQSASSSSSSSLLQSSIIDNQNLNPQPNPSSSISISQQHLIPSSSTLDYQQHKSMQQSQTLNQLHSTFQLQQTLQRSPSMSRLNQLNTQSQQFAGVMRQQTGLYGSQMNFGGSASAQLQNQQLGGLNLSRSTMIGQTGHFPTLSGAGSQFNLLSSPRQTGGLVQGSQFSSSNSAGQPLQGMQTLGMMGSPNLNSQLRASGALAYAQQLRMNQGQIRQQLAQQNSRNTPQAEVGHSAILWYVLLPQPTGWVRIVFMYAMGTYPVGRVHATQFWNFVSSVLNTETSPNIHILAHPIPIPSMLAFVTCLWLRILSFVVQGLQRSTSLAFMNSQLSGLSQNGQPAMIHNSLTQQQWLKQMPAMSGPSSPLRLQQHQRQQQLASSNQLQQNSMALNPQQLSQLIQQQKPMGQPQLLQQQQPQPQQQPQPQQQQQQQQQQQQQLQPQQQQQPLQQQQQPLQQQQQPLQQQQQPLQQQQQQLQPQQQQLNPQQQLLQQQQQQLRQQQPQQQQSQLQAIVHQQQQQYSPRIPGPTGQKSLSLTGSQPDATASGATTPGGSSSQGTEATNQLLGKRKIQDLVSQVNPQAKLDPEVIDLLLELADDFIDSATTHSCILAKHRKSSTLESKDLLLHLEKDLDLTIPGYSREEKYHNKHLSNDLHKRRQDMVHTLMESSNSETSMNNTKEMSRQGLHNPVGAQQLVRALSSEQLVPHSTGSQMLPQMTRF 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0124 732 MobiDBLite consensus disorder prediction 370 396 - -
Lal18g0124 732 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 325 447 - -
Lal18g0124 732 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 11 244 - -
Lal18g0124 732 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 471 731 - -
Lal18g0124 732 MobiDBLite consensus disorder prediction 521 572 - -
Lal18g0124 732 CDD TAF12 578 646 IPR003228 GO:0005669|GO:0006352
Lal18g0124 732 Pfam Transcription initiation factor TFIID subunit A 579 645 IPR003228 GO:0005669|GO:0006352
Lal18g0124 732 MobiDBLite consensus disorder prediction 1 53 - -
Lal18g0124 732 Gene3D Histone, subunit A 573 647 IPR009072 GO:0046982
Lal18g0124 732 MobiDBLite consensus disorder prediction 414 448 - -
Lal18g0124 732 SUPERFAMILY Histone-fold 576 646 IPR009072 GO:0046982
Lal18g0124 732 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 11 244 IPR037794 GO:0000124|GO:0005669|GO:0046695
Lal18g0124 732 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 325 447 IPR037794 GO:0000124|GO:0005669|GO:0046695
Lal18g0124 732 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 471 731 IPR037794 GO:0000124|GO:0005669|GO:0046695
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0124 Lal-Chr18 978489 984467 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0124 K03126 - gmx:100783017 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0124 18 978489 984467 Lal18g0124 18 978489 984467 ECH
Lal1g1382 1 15861938 15869695 Lal18g0124 18 978489 984467 LSH