Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1364 ATGACTAAAGCTGAGTTTAGGGAATCTGGTCTAGTCGTGAAGAAGATGAAAAAAACAATTTTGTCTCCACAAAATGTTGATTATTGTAAATCTGCAGATTGCCAAGATAGACTTGGTGATTTAACGGATTGCCTTATACATCATATTTTGTCGTTTGTGGAAACAAAGGATGCAATTCGAACTTGTGTTTTATCAAAAAGGTGGAGGCATCTTTGGGCTTCAGTTACCTGCCTGAACTTTAGCAGCAAATCGTTCGCTCGGCTGGTTGAATTCAAGAAATTTGTGTTGTGGGTCCTATCCCATCGTGATTTTTCCCAGGTCAAAGTTCTTATTTACTCTCGCTTTGGGGTAGATTATGCAACAGATCAATATCTATTGAATAAGGTTGTTGAATATGCAGCATCACATGGTGTCGAAGAAATCAGAATCAATCTCCGGGCAAAAACTTGTGGTAGTCCACCCGTTGAAATCCCTTTGGCTCTATTTGCTTGTCAATCCTTGAAAACGCTCGAGTTCAAAGATTGCCATCCTACAAATGTGTCATTCCCTTTTGGCTGCAAATCATTAGAAATATTGCGTTTGGAACGCTTCTCAATTCATCCTGCTGCAGCCAACTTTTCAAATCCATTTGCAAGTTTAGCCGAACTTTTTGGTTTTACGACATTGACAACTTTGCACTTAAACAGCTTCAGTCTGTGTAATACCGGGATTGACTCTCTAGACCCCTTCGGCAATTGTGTCAATTTGAAGACTTTGCACATAAGTGAAATGTCCTTTCAGTCTGATTTGAACCCTAAGAATTTCGTGATATCTGCTCCACAACTCAAGAACTTGAGTCTAATGTGCAACCGCTTCAAATGCAAGATTATAGTTGCTTCACCACAGCTTACAAATTTCAGCTACTTATATTCTACACGTTGTTCCTTCCTTGAGTTTACTCTTCCTTCCTTGGACAGTTTGATCATTGATATTCATGAACTACATGACCAGTTGGAAAAGTCTCATCATAAGAAGAGACGGGACACGTTACATGGTTTGGTCAACATGTTACGGGGACATTGTAATTCTGAAGCAGTTAAACTATCCTTCTGCACCGTCGTGGTTACCTGTGGGACCGCAGTCTCGTTAAAACCCGAATCTTTGTCTTTCGGTAAAATGAAGTTATTGAATTTCGGAGTTGGATCGACATATAAAATCTTCATCAGTAACCTTGACCATATTGCTGCCTACTTCCGCAATTGCTCTCAGCATGCAGACTTTGAGGTTGTGACTATTTAG 1278 0.3991 MTKAEFRESGLVVKKMKKTILSPQNVDYCKSADCQDRLGDLTDCLIHHILSFVETKDAIRTCVLSKRWRHLWASVTCLNFSSKSFARLVEFKKFVLWVLSHRDFSQVKVLIYSRFGVDYATDQYLLNKVVEYAASHGVEEIRINLRAKTCGSPPVEIPLALFACQSLKTLEFKDCHPTNVSFPFGCKSLEILRLERFSIHPAAANFSNPFASLAELFGFTTLTTLHLNSFSLCNTGIDSLDPFGNCVNLKTLHISEMSFQSDLNPKNFVISAPQLKNLSLMCNRFKCKIIVASPQLTNFSYLYSTRCSFLEFTLPSLDSLIIDIHELHDQLEKSHHKKRRDTLHGLVNMLRGHCNSEAVKLSFCTVVVTCGTAVSLKPESLSFGKMKLLNFGVGSTYKIFISNLDHIAAYFRNCSQHADFEVVTI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1364 425 Gene3D Ribonuclease Inhibitor 129 335 IPR032675 -
Lal1g1364 425 Gene3D - 24 77 - -
Lal1g1364 425 PANTHER F-BOX PROTEIN-LIKE 23 425 - -
Lal1g1364 425 Pfam F-box domain 40 74 IPR001810 GO:0005515
Lal1g1364 425 SUPERFAMILY RNI-like 156 329 - -
Lal1g1364 425 SMART fbox_2 41 81 IPR001810 GO:0005515
Lal1g1364 425 SUPERFAMILY F-box domain 36 90 IPR036047 GO:0005515
Lal1g1364 425 PANTHER CYCLIN-LIKE F-BOX 23 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1364 Lal-Chr1 15510074 15515016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1364 36 205 EF-hand Containing Proteins AT5G41840 29.843 1.84e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1364 - - vun:114167379 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1364 1 15510074 15515016 Lal18g0141 18 1130599 1135294 LSH