Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0141 ATGAAGAAGATGAAAAAAAGAATTTTAGCTTCGCAAAATGTTGATTATTGTAAATCTGCTGATTGCCACGATAGACTTGGTGATTTACCGGATTGCCTTATCCATCATATTTTGTCGTTTTTGGAAACAAAAGATGCAATTCGAACTTGTGTTTTATCAAAAAGGTGGAGGCATCTTTGGGCTTCAGTTACCTGCCTGAATTTCAGCAGCAAATCATTTGCTCGGCTGGTTGATTTCAGGAAATTTGTGTTGTGGGTCCTATCCCATCGCGATTCTTCCCATGTCAAAGTTCTTATTTACTCTCGCTTCGGAGTAGATTATGCGACAGATCAATATCTATTGAATAAGGTTATTGAATATGCAGCATCACATGGTGTTAAAGAAATCAGAATCAATCTTCAGGCAAAAACTTTTGGCAGTCCACCATTTGAAATCCCCTTGGCTCTATTTGCTTGCCGATCCTTGAAAATGCTTGAGTTTAAAGATTGTCATCCTACAAATGTGTCATCCCCTATAGGTTGCAGATCATTGGAAATATTGCATTTGGAACGATTCTCAATGCATCCTGCTGCGGCTGATTTTTCGAATCCATTTGCAAGTTTGGCAGAACTTTTTGGTTTTACAACATTGACAACTTTGCACCTAAACAGCTTCAGTCTGTGTTATACAGGGATTGACTGTCTGGATCCTTTTGTCAATTGTGTCAATTTAAAGACTTTGCACTTAAGTGAAATGTCGTTTCAGTCAGATCTGAACCCTAGGGATTTCGTGATATCTGCTCCCCAACTAAAGAACTTGAGTCTAATGTGCAACCGCTTCAAATGCAAGATTATAGTTGCTGCACCACAGCTTACCAATTTCAGCTACTTATATTCTACACCTTGTGCCTTTTTTGAGTTTGGCCTTCCTTCCTTGGATGGCTTGACCATTGATATTCATGAACCACATGATCAGTTGGAAAAGTCTCATCATAAGAAGAGGCAGGAGACATTACATGGTTTGATCAATATGTTACGGGGACATTGTAATTCTGAAGCAGTTAAACTATCCTTCTGCACTGTTGCGGTTACCTGTGGGACTGCAATCTTGTTAAAACCAGAATGTTTGTCTTTTAGTAAATTAAAGTCATTGAATTTCGGGGTTGGATCAACATATAAAATCTTCATTAACAACCTTGACCATATAGCTGCCTACTTCCGCAATTGCTCTCAGCATGCAGACTTTGAGATAGTGACTATTTAG 1242 0.3873 MKKMKKRILASQNVDYCKSADCHDRLGDLPDCLIHHILSFLETKDAIRTCVLSKRWRHLWASVTCLNFSSKSFARLVDFRKFVLWVLSHRDSSHVKVLIYSRFGVDYATDQYLLNKVIEYAASHGVKEIRINLQAKTFGSPPFEIPLALFACRSLKMLEFKDCHPTNVSSPIGCRSLEILHLERFSMHPAAADFSNPFASLAELFGFTTLTTLHLNSFSLCYTGIDCLDPFVNCVNLKTLHLSEMSFQSDLNPRDFVISAPQLKNLSLMCNRFKCKIIVAAPQLTNFSYLYSTPCAFFEFGLPSLDGLTIDIHEPHDQLEKSHHKKRQETLHGLINMLRGHCNSEAVKLSFCTVAVTCGTAILLKPECLSFSKLKSLNFGVGSTYKIFINNLDHIAAYFRNCSQHADFEIVTI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0141 413 Pfam F-box domain 28 62 IPR001810 GO:0005515
Lal18g0141 413 Gene3D Ribonuclease Inhibitor 119 295 IPR032675 -
Lal18g0141 413 ProSiteProfiles F-box domain profile. 23 76 IPR001810 GO:0005515
Lal18g0141 413 PANTHER F-BOX PROTEIN-LIKE 16 413 - -
Lal18g0141 413 SUPERFAMILY F-box domain 24 78 IPR036047 GO:0005515
Lal18g0141 413 SUPERFAMILY L domain-like 145 301 - -
Lal18g0141 413 Gene3D - 10 65 - -
Lal18g0141 413 PANTHER CYCLIN-LIKE F-BOX 16 413 - -
Lal18g0141 413 SMART fbox_2 29 69 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0141 Lal-Chr18 1130599 1135294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0141 24 190 EF-hand Containing Proteins AT5G41840 30.851 9.93e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0141 - - vun:114167379 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1364 1 15510074 15515016 Lal18g0141 18 1130599 1135294 LSH