Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1239 ATGTCAACAGAGGATGTTTTGATTGGTGCAATTGACCAAGGAACCAGCAGCACCAGGTTCATCATTTATGATGGTTCAGCTAGACCCATTGCATCTCATCAAGTTGAGTTCACTCAATTCTACCCACAAGCTGGATGGGTGGAGCATGACCCAATGGAGATAATGGAAAGTGTTAAGGTTTGTATTGCTAAGGCTGTGGATAAAGCTACAGCTGATGGATTCAATGTTGATAAGAATTTGAAGGCTATTGGTCTCACCAATCAGAGAGAAACCACTCTTGTTTGGAGTAAATCGAATGGTGCTCCTCTTTACAATGCCATTGTTTGGATGGATGCTCGAACCACCGCTATTTGCAGTCGATTGGAAAAGGAGCTAACTGGGGGAAAAAGGCATTTTGTGGAGAGTTGTGGTTTGCCAATAAGCTCATACTTCAGTGCTTTGAAGCTTCTGTGGTTGATCGAAAACGTGGATGCAGTCAGGGAAGCGGTAAAGGAAAAAGATGCCATGTTCGGAACAATAGACACATGGTTGATATGGCAATTAACTGGTGGGTTGAAGGGAGGATTGCACGTCACAGATGTTTCAAATGCATCTCGTACAATGTTGATGAATCTCAAGACCCTTGATTGGGATGAATCCACATTAAAGGAGCTTGGAATTCCAGCCGAAATTTTGCCTAAAATTGTAAGCAACGCTGAAGTTATAGGAAATATTGCAGGTGGATGGCCACTCGCCGGTGTCCCTATTGCAGGATGTTTAGGGGATCAACATGCAGCAATGCTAGGACAAGCATGCAGTAGAGGGGAGGCTAAAAGCACTTATGGCACAGGTGCTTTCATACTAATGAATACCGGCGATGAGATAGTTAAATCGACGCATGGTCTTCTAACCACTGTAGCCTTCAAGCTTGGCAAGGAAGCTAAAGCCACCTATGCACTAGAAGGATCGGTTGCTATTGCTGGAGCTGCAGTGCAATGGCTTAGAGACAGCGTCGGCATGATTTCTAGCTCGAAGGAGATAGAGGAGCTAGCGTCACAGGTTGAATCATCTCAAGGGGTTTACTTTGTTCCCGCTTTTAATGGATTGTTCGCACCATATTGGCGTGAGGATGCTCGTGGTGTTTGTATTGGAATAACAAGGTTTACAACAAAGGCTCACATTGCTAGAGCTGTGCTTGAGTGCATAGCTTTTCAAGTGAAAGATGTATTGGATGCAATGCACAAAGATGCAGGTAAGGTTGAATCCAACGAGTTTTTGCTCAGAGTGGATGGTGGTGCAACTGTTAACAACCTATTGATGCAGATTCAGGCCGATTTGACCGGAAATCCAGTGATTAGACCTGCTGACATAGAGACAACGGCACGCGGGGCAGCCTTTGCTGCCGGATTAGCTATTGGTGTTTTTAAAGAAGATTATATCTTCGATTCAAAGGATAAAATGAAGGATGCTATTGTTTTCCGACCGGTAATGACCAAGGAAGTGAGAACAAAGAAAGTGGAATCTTGGAGCAAAGCTGTTACTAGATCTTATGATTTGGCTGATCTTGCTATTTGA 1554 0.4402 MSTEDVLIGAIDQGTSSTRFIIYDGSARPIASHQVEFTQFYPQAGWVEHDPMEIMESVKVCIAKAVDKATADGFNVDKNLKAIGLTNQRETTLVWSKSNGAPLYNAIVWMDARTTAICSRLEKELTGGKRHFVESCGLPISSYFSALKLLWLIENVDAVREAVKEKDAMFGTIDTWLIWQLTGGLKGGLHVTDVSNASRTMLMNLKTLDWDESTLKELGIPAEILPKIVSNAEVIGNIAGGWPLAGVPIAGCLGDQHAAMLGQACSRGEAKSTYGTGAFILMNTGDEIVKSTHGLLTTVAFKLGKEAKATYALEGSVAIAGAAVQWLRDSVGMISSSKEIEELASQVESSQGVYFVPAFNGLFAPYWREDARGVCIGITRFTTKAHIARAVLECIAFQVKDVLDAMHKDAGKVESNEFLLRVDGGATVNNLLMQIQADLTGNPVIRPADIETTARGAAFAAGLAIGVFKEDYIFDSKDKMKDAIVFRPVMTKEVRTKKVESWSKAVTRSYDLADLAI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1239 517 Gene3D - 264 511 - -
Lal1g1239 517 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 143 155 IPR018483 GO:0005975|GO:0016773
Lal1g1239 517 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 464 IPR018485 GO:0005975|GO:0016773
Lal1g1239 517 PANTHER BNAA02G19720D PROTEIN 3 513 - -
Lal1g1239 517 Gene3D - 2 262 - -
Lal1g1239 517 PANTHER SUGAR KINASE 3 513 - -
Lal1g1239 517 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 262 IPR018484 GO:0005975|GO:0016773
Lal1g1239 517 PIRSF GlpK 5 516 IPR000577 GO:0005975|GO:0016301
Lal1g1239 517 TIGRFAM glycerol_kin: glycerol kinase 7 510 IPR005999 GO:0004370|GO:0006072
Lal1g1239 517 SUPERFAMILY Actin-like ATPase domain 266 510 IPR043129 -
Lal1g1239 517 SUPERFAMILY Actin-like ATPase domain 8 265 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1239 Lal-Chr1 13701429 13704766 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1239 K00864 - gmx:547750 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1239 1 13701429 13704766 Lal1g1239 1 13701429 13704766 ECH
Lal1g1239 1 13701429 13704766 Lal18g0218 18 1803189 1806229 LSH