Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0218 ATGTCAGAAGAGGATGTCTTCATTGGTGCAATTGACCAAGGAACCAGCAGTACCAGGTTCATCATCTATGATGGTTCAGCTAAACCTATTGGGTCTCATCAGGTTGAATTCACTCAATTCTACCCACAAGCAGGTAGTAGATGGGTCAGTAACCAATCCCCAAAAGCTTTTTCTTATGGTATGATCAAATTGAAAAGAATACATTTTGCTGAAAGATGGGTGGAGCATGATCCAATGGAGATAGTGGAAAGTGTGAAGGTCTGTGTTGCTAAGGCTATGGCTGATGGATTCAATGTTGATAAGAATTTGAAGGCTATTGGTCTCACCAATCAGAGAGAAACCACTCTTGTTTGGAGCAAATCCACTGGTGCTCCTCTTTACAATGCCATTGTTTGGATGGATGCTCGAACCACTGCTATTTGCAGTCGATTGGAAAAGGAGTTATCTGGTGGTAAAAGCCATTTTGTGGAGAGTTGTGGTTTGCCTATAAGCTCTTATTTCAGTGCTCTGAAACTTCTATGGTTGATGGAAAATGTGGATGCAGTAAAGGAAGCTATAAAGAAAAAGGATGCCTTGTTTGGAACAATAGACACTTGGTTGATATGGCAATTAACTGGTGGGGTGAATGGAGGATTGCATGTTACCGATGTTTCAAATGCATCTCGTACGATGCTGATGAATCTTAAGACCCTTGATTGGGATGCATCTACCTTAAAGGAGCTTGGAATCCCTGCTGAAATTTTGCCTAAAATTGTCAGCAATGCCGAAGTTATAGGAAATGTTGCTGCTGGGTGGCCATTTGCTGGTGTTCCTATTGCAGGATGTTTAGGGGATCAACATGCAGCAATGCTAGGACAAGCATGCAATAAAGGTGAGGCTAAAAGTACTTATGGCACCGGTGCTTTCATACTACTAAATACCGGCGATGAAATAGTTAAATCGAATCATGGTCTGCTAACAACGGTAGCCTTCAAGCTTGGCAAGGAAGCTAAAACCAGTTATGCACTGGAAGGATCAGTTGCTATTGCTGGAGCTGCAGTACAGTGGCTTAGAGACAGTGTAGGCATGATTTCTAGCTCTAAGGAGATAGAGGAGCTCGCGTTGCAGGTTGAATCTGCCGGTGGGGTTTATTTTGTTCCTGCTTTTAATGGATTGTTCGCACCATGGTGGCGTGAGGATGCTCGTGGCGTTTGTATTGGAATAACAAGGTTTACAACAAAGGCTCACATCGCTCGAGCAGTGCTTGAGAGCATGGCTTTTCAAGTGAACGATGTCTTGGATTCAATGCAAAAAGATATGGGGAAAGTTGAATCCAGTGACTATTTGCTCAGAGTGGACGGTGGTGCAACTGTTAACAACCTGTTGATGCAGATTCAGGCAGATTTAACAGGAAGTCCAGTGATTAGACCTGCTGATATAGAGACAACAGCACTTGGAGCAGCATTTGCTGCTGGATTAGCTGTTGGTGTTTGGAAAGAAGAGTATATCTTTGATTCTAAGGTCAAGATGAAGGATGCTACTGTTTTTCATCCTGTGATGGCTGAGGAAGTGAGGGCAAAGAAAATGAATTCATGGTGCAAAGCTGTTACCAGATCTTATGACTTGGCTGATCTTACTCTCTGA 1623 0.4301 MSEEDVFIGAIDQGTSSTRFIIYDGSAKPIGSHQVEFTQFYPQAGSRWVSNQSPKAFSYGMIKLKRIHFAERWVEHDPMEIVESVKVCVAKAMADGFNVDKNLKAIGLTNQRETTLVWSKSTGAPLYNAIVWMDARTTAICSRLEKELSGGKSHFVESCGLPISSYFSALKLLWLMENVDAVKEAIKKKDALFGTIDTWLIWQLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDASTLKELGIPAEILPKIVSNAEVIGNVAAGWPFAGVPIAGCLGDQHAAMLGQACNKGEAKSTYGTGAFILLNTGDEIVKSNHGLLTTVAFKLGKEAKTSYALEGSVAIAGAAVQWLRDSVGMISSSKEIEELALQVESAGGVYFVPAFNGLFAPWWREDARGVCIGITRFTTKAHIARAVLESMAFQVNDVLDSMQKDMGKVESSDYLLRVDGGATVNNLLMQIQADLTGSPVIRPADIETTALGAAFAAGLAVGVWKEEYIFDSKVKMKDATVFHPVMAEEVRAKKMNSWCKAVTRSYDLADLTL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0218 540 SUPERFAMILY Actin-like ATPase domain 288 533 IPR043129 -
Lal18g0218 540 PANTHER SUGAR KINASE 53 536 - -
Lal18g0218 540 PANTHER SUGAR KINASE 2 50 - -
Lal18g0218 540 SUPERFAMILY Actin-like ATPase domain 8 288 IPR043129 -
Lal18g0218 540 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 166 178 IPR018483 GO:0005975|GO:0016773
Lal18g0218 540 PIRSF GlpK 5 63 IPR000577 GO:0005975|GO:0016301
Lal18g0218 540 PIRSF GlpK 59 539 IPR000577 GO:0005975|GO:0016301
Lal18g0218 540 Pfam FGGY family of carbohydrate kinases, C-terminal domain 293 487 IPR018485 GO:0005975|GO:0016773
Lal18g0218 540 Gene3D - 3 286 - -
Lal18g0218 540 TIGRFAM glycerol_kin: glycerol kinase 7 533 IPR005999 GO:0004370|GO:0006072
Lal18g0218 540 Gene3D - 287 534 - -
Lal18g0218 540 PANTHER - 2 50 - -
Lal18g0218 540 PANTHER - 53 536 - -
Lal18g0218 540 Pfam FGGY family of carbohydrate kinases, N-terminal domain 52 285 IPR018484 GO:0005975|GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0218 Lal-Chr18 1803189 1806229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0218 K00864 - gmx:547750 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0218 18 1803189 1806229 Lal18g0218 18 1803189 1806229 ECH
Lal1g1239 1 13701429 13704766 Lal18g0218 18 1803189 1806229 LSH