Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal1g0385 | ATGGAATTGGAGAGAAAAAGTGAGATGAAAGAATCAAGGTTCAAGAGAATTTGTGTGTTCTGTGGAAGCAGCCCTGGGAATAAGACCACTTATAAGGATGCTGCTATTGAACTTGGAAAGGAATTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGCAGTATTGGTTTGATGGGGTTGGTTTCTCAAGCTGTTTATGATGGAGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTCATGCCAAGAGAGATTACTGGAGAGACAGTGGGGGAAGTGAAGGCAGTATCAGACATGCATCAAAGGAAAGCAGAGATGGCTAAGCATTCTGATGCCTTTATTGCCTTACCTGGTGGGTATGGGACATTGGAAGAGCTACTTGAGGTGATAACTTGGGCTCAACTTGGCATTCATGATAAACCAGTGGGGTTGCTGAATGTTGATGGATATTACAATTCATTGTTGTCTTTCATTGATAAAGCTGTGGAAGAAGGTTTCATTAGCCCCAAAGCACGCAATATCATTGTATCTGCCCCATCAACAAAAGAACTTGTCAAGAAAATGGAGGAATATTTCCCACAACATGAAAGAGTTGCCTCTAAGCTAAGCTGGGAAAATGGGCAGCCAGAATATTCTTCCTCAGATTGA | 651 | 0.4209 | MELERKSEMKESRFKRICVFCGSSPGNKTTYKDAAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMPREITGETVGEVKAVSDMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARNIIVSAPSTKELVKKMEEYFPQHERVASKLSWENGQPEYSSSD | 216 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal1g0385 | 216 | PANTHER | LOG FAMILY PROTEIN YJL055W | 4 | 214 | - | - | |
| Lal1g0385 | 216 | Pfam | Possible lysine decarboxylase | 59 | 189 | IPR031100 | - | |
| Lal1g0385 | 216 | Gene3D | - | 3 | 191 | - | - | |
| Lal1g0385 | 216 | PANTHER | CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 | 4 | 214 | - | - | |
| Lal1g0385 | 216 | SUPERFAMILY | MCP/YpsA-like | 14 | 192 | - | - | |
| Lal1g0385 | 216 | TIGRFAM | TIGR00730: TIGR00730 family protein | 15 | 192 | IPR005269 | GO:0009691|GO:0016787 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal1g0385 | Lal-Chr1 | 2348090 | 2352365 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal1g0385 | K22522 | - | gmx:100815735 | 389.808 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal1g0385 | 1 | 2348090 | 2352365 | Lal1g0385 | 1 | 2348090 | 2352365 | ECH | |
| Lal1g0385 | 1 | 2348090 | 2352365 | Lal25g0187 | 25 | 1231566 | 1241004 | ECH | |
| Lal1g0385 | 1 | 2348090 | 2352365 | Lal2g0299 | 2 | 1751782 | 1754900 | LSH | |
| Lal25g0187 | 25 | 1231566 | 1241004 | Lal1g0385 | 1 | 2348090 | 2352365 | PCT | |
| Lal8g0152 | 8 | 1034814 | 1038351 | Lal1g0385 | 1 | 2348090 | 2352365 | PCT | |
| Lal1g0385 | 1 | 2348090 | 2352365 | Lal25g0187 | 25 | 1231566 | 1241004 | PCT | |
| Lal1g0385 | 1 | 2348090 | 2352365 | Lal8g0152 | 8 | 1034814 | 1038351 | PCT |