Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0369 ATGAGAAACAGAAACACCCTTTTGCTCTTGCTCCTTTTTATTATATGCAATGGAATGGCCTTAACAATGGGGTTAGTTGAATATAAAGAGAAGAGAACAGTGAAAGAAGAATGGACTTCAATGTCATCAGAGAGTAGTTTGTTCTTGATGCATGATTCCAAGAGTGTGGTGAAGACTGAAGCTGGAGAAATGATAATGAAAAACTATGGTGGTGGTGGGATTTTAGAGAGGCGCATGCATATTGGTTTCATCACTATGGAACCAAAGTCCCTTTTCATTCCTCAGTACCTTGATTCCAATTTGGCAATATTCATCCGTACAGGGGAAGCAAATTTGGGAGTGATATATGAAAATGATCTAGGTGAAAGAAGACTTAAAGCAGGGGATGTGTATATAATTCCAGCTGGTTCACCATTCTATTTAGTAAATGTGTTAGAGGGTCAAAGACTTCACATAATTTGCAGCATTGAATCCAAAGAGAATTTGGGAGCAGATAGCTTCCATTCCTTCTATTTAGGTGGAAGAGATTCAGTGCTTTCTGGATTCAGATCTGAAATCCTTGAAACAGCATTTAATGCATCAAGAACAGAGGTAAGGAAAATCTTCACCAAAGAAGTAGAAGGGCCAATTGTATATTTAGATGATTCTCATGCCCCTACACTATGGACCAAGTTCCTTGAACTCAAGAAGGAAGACAAAGTGCAACACATGAAGGGAATGTTGCAGTTTGACCAAGAAGATGAAGAAGAGAAACAAATAAGTTGGTCATGGAAGAAAGTGTTGGCAACATTGTTATTAGGGAGAGAGAGGAAGAACAAGGGTAGGGTTAAGGGCACTGGTGATTCCCCTGACTCAGTGAATCTGTATAACAGAAAACCAGATTTCAGAAACAATCATGGTTGGAGCATTGCTCTTGATGGAAGAGATTATGCTCCTCTCAAAACAGCTCGCATTGGCATTTATCATGTCAATCTTACTGCGGGATCTATGATGGCACCCCATGTGAATCCAATAGCAACAGAATATGGCATAGTACTAAGTGGTTCTGGTAGAATTGAGATAGTGTTTCCAAACGGAACAAGTGCAATGAACACTAAGATTAAACAAGGGGACGTGTTTGTTGTACCTCGTTACTTCCCTTTTTGTCAAATAGCATCAAGAAATGGACCCTTAGAGTTCTTTGGGTTCACCACCTCAGCCAGAAGGAACAGGCCACAGTTCCTGGCGGGTGCAGCCTCCATCTTAAGGACCATGATGGGTCCTGAGCTTGCAGCGGCGTTTGGGGTCACGGAGGACACGATGCGGCGCGTGGTTGATGGTCAGCATGATGCTGTGATATTAGCCTCACCATCTGCTGCACCGGGAAATGTAGATAATAAGCAAATGAGTATGAATGTTTAG 1401 0.4168 MRNRNTLLLLLLFIICNGMALTMGLVEYKEKRTVKEEWTSMSSESSLFLMHDSKSVVKTEAGEMIMKNYGGGGILERRMHIGFITMEPKSLFIPQYLDSNLAIFIRTGEANLGVIYENDLGERRLKAGDVYIIPAGSPFYLVNVLEGQRLHIICSIESKENLGADSFHSFYLGGRDSVLSGFRSEILETAFNASRTEVRKIFTKEVEGPIVYLDDSHAPTLWTKFLELKKEDKVQHMKGMLQFDQEDEEEKQISWSWKKVLATLLLGRERKNKGRVKGTGDSPDSVNLYNRKPDFRNNHGWSIALDGRDYAPLKTARIGIYHVNLTAGSMMAPHVNPIATEYGIVLSGSGRIEIVFPNGTSAMNTKIKQGDVFVVPRYFPFCQIASRNGPLEFFGFTTSARRNRPQFLAGAASILRTMMGPELAAAFGVTEDTMRRVVDGQHDAVILASPSAAPGNVDNKQMSMNV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0369 466 Gene3D Jelly Rolls 278 450 IPR014710 -
Lal1g0369 466 SUPERFAMILY RmlC-like cupins 77 444 IPR011051 -
Lal1g0369 466 CDD cupin_7S_vicilin-like_N 56 213 - -
Lal1g0369 466 SMART Cupin_1_3 286 435 IPR006045 -
Lal1g0369 466 SMART Cupin_1_3 48 199 IPR006045 -
Lal1g0369 466 Pfam Cupin 79 198 IPR006045 -
Lal1g0369 466 Pfam Cupin 287 433 IPR006045 -
Lal1g0369 466 PANTHER OS03G0336100 PROTEIN 2 455 - -
Lal1g0369 466 CDD cupin_7S_vicilin-like_C 293 444 - -
Lal1g0369 466 PANTHER OS03G0336100 PROTEIN-RELATED 2 455 - -
Lal1g0369 466 Gene3D Jelly Rolls 40 225 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0369 Lal-Chr1 2227597 2229980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0369 42 457 Miscellaneous Gene Families AT2G18540 33.021 4.75e-50 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0369 - - gmx:100818796 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0369 1 2227597 2229980 Lal1g0369 1 2227597 2229980 ECH
Lal10g1241 10 18698756 18701068 Lal1g0369 1 2227597 2229980 PCT
Lal1g0369 1 2227597 2229980 Lal10g1241 10 18698756 18701068 PCT